Gene
| Gene Model ID | pfu_aug2.0_327.1_23880 |
|---|---|
| Locus | scaffold327.1 : 267165 ... 280079 : - |
| To GenomeBrowser | scaffold327.1:267165..280079 |
| Genes list of scaffold | scaffold327.1 |
| Synonym | pfu_aug1.0_64466.1_05749 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_327.1_23880.t1 | 1 | 1 | Rap_GAP | 221 | 404 | 0.0 | 208.2 | 0.0 | 0.0 | 207.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_327.1_23880.t1 | gi|524875039|ref|XP_005094251.1| | PREDICTED: rap1 GTPase-activating protein 1-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_327.1_23880.t1 | gi|524875035|ref|XP_005094249.1| | PREDICTED: rap1 GTPase-activating protein 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_327.1_23880.t1 | gi|524875037|ref|XP_005094250.1| | PREDICTED: rap1 GTPase-activating protein 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_327.1_23880.t1 | gi|642931659|ref|XP_008196676.1| | PREDICTED: rap1 GTPase-activating protein 1 isoform X4 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_327.1_23880.t1 | gi|91088399|ref|XP_972896.1| | PREDICTED: rap1 GTPase-activating protein 1 isoform X2 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_327.1_23880.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_327.1_23880.t1 atgttgatcaacctacaagaacgaggaagaatagacgatcaaagatgcgagatgacggccttctttcctaagagcccgaa ggccgtgccatcccctgaacttaaacgaactgccaagaccatagaagagattctatcaaaacccgggccgtaccagatga tagtacagccccctggtggcgggtattggatcgatctccatgacaaccacggaccaatcgcagagaatggtactcccacc cctgtagacccaagtatgatggaagttaaaatacaattggacgagggagcacactcctatcggcaatactttcttggaaa ggaacactttaattattttgctgtagatgacaatgtgggtccaatcataatgtcactgaaggatgagaacattaatgacc aagacaatgtcaggtgtatactcaggaccaagtttagtagtgtccataaactggtatcatacgaccaaatagataacatt cctaatcccctcaaagttgccaagtgtttgtgtgaagaaatctcgacagaaaaattccacccagtcttgtcacctaaagg atccgagatcattgtacaatatgatgaacataacgttacaaatatgtacaaatttggaattatatatcagaaaaaagggc agaccaaggaagagaatctgttcgggaatcgagaacacagccctgccatggaggaattcctgaatctcataggacaaaaa gtgcaattaaaagattttgcaaagtatcgtggtggattagacaccatgtacggacagacaggggagacgtccttcttcac tgagttccaggacagggagatcatgtttcacgtatcgacacttttaccgtacacggacggtgataatcagcagctacaga gaaaacgacacatcggtaacgacatcgtggccatcgtgttccaggaggaaaacacgccatttgtacccaatatgatcgca tcccatttcttacattcctacattgttgtacagccttttatagaggaggaagttactaagtacaaggtgtcagtgacggc taggagcgatgtcccaatgtttggaccaaccttaccacacaatgccgtgtttgaaagtggaccagacttcagggatttca ttttgaccaagcttataaatggagaaatggcatgttataaagcgcagcagtttgctaaattaggggaaagaacgagaggt gcattattagaggtcttacatcaagaactccatcgtaaaaatgaggaattatttgggaccatttccgtccctcctgggaa acccgagggcagtaagctcatagagacgtttaaacgcgtgttgagtacgaagacacgtacttcggaatccagtctgtcat cagctaggaggaacggaacatcgttatcgactgtgggggaagacgaggtcaagtctagtccaaagaagtctccaagggct gacaagaagttgaacagacagttgtcatcgagttttgaaagaaaacaaaaggataaatttgttcagcgctatgatagtca aagtacgcagtcatcctataaaacctgtagtgcgccaaatagtccccaatccagtcctagctcttctgcatctaaccaac ggcggagtaacaacagcatccagatttctccctccaattcagagagttcctttaacagtatggaggactacacagtaggg cagacaactcagcatgaggattcagatacaggattggagagtatgtcctctacagggaccacatgttataacttcataaa accatcagtgtctaatagttttagtgaggacagcgctgggtgtgtctttgtcacagactatgatgctggagatggtaata tcaagcatgtagacttatcatccatggagatacagaggttgaagaaggacaaagttgaactaatcaaacaaaataaaact agtcaaaaagaaatccaatcgttaaaagaacgagagtcccaaatactgacggaattacgcaatgctcagcaagaaatatt ccgattaaaacataacatggttaacatatcacatagtaacggaaaagaggccgtcgtttag |
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Protein
| Protein ID | pfu_aug2.0_327.1_23880.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_327.1_23880.t1 MLINLQERGRIDDQRCEMTAFFPKSPKAVPSPELKRTAKTIEEILSKPGPYQMIVQPPGGGYWIDLHDNHGPIAENGTPT PVDPSMMEVKIQLDEGAHSYRQYFLGKEHFNYFAVDDNVGPIIMSLKDENINDQDNVRCILRTKFSSVHKLVSYDQIDNI PNPLKVAKCLCEEISTEKFHPVLSPKGSEIIVQYDEHNVTNMYKFGIIYQKKGQTKEENLFGNREHSPAMEEFLNLIGQK VQLKDFAKYRGGLDTMYGQTGETSFFTEFQDREIMFHVSTLLPYTDGDNQQLQRKRHIGNDIVAIVFQEENTPFVPNMIA SHFLHSYIVVQPFIEEEVTKYKVSVTARSDVPMFGPTLPHNAVFESGPDFRDFILTKLINGEMACYKAQQFAKLGERTRG ALLEVLHQELHRKNEELFGTISVPPGKPEGSKLIETFKRVLSTKTRTSESSLSSARRNGTSLSTVGEDEVKSSPKKSPRA DKKLNRQLSSSFERKQKDKFVQRYDSQSTQSSYKTCSAPNSPQSSPSSSASNQRRSNNSIQISPSNSESSFNSMEDYTVG QTTQHEDSDTGLESMSSTGTTCYNFIKPSVSNSFSEDSAGCVFVTDYDAGDGNIKHVDLSSMEIQRLKKDKVELIKQNKT SQKEIQSLKERESQILTELRNAQQEIFRLKHNMVNISHSNGKEAVV |
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