Gene
| Gene Model ID | pfu_aug2.0_329.1_30623 |
|---|---|
| Locus | scaffold329.1 : 30117 ... 35895 : - |
| To GenomeBrowser | scaffold329.1:30117..35895 |
| Genes list of scaffold | scaffold329.1 |
| Synonym | pfu_aug1.0_5097.1_23725 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_329.1_30623.t1 | 4 | 1 | Ank_2 | 46 | 58 | 2.7e-13 | 50.0 | 1.4 | 3500.0 | -1.7 |
| pfu_aug2.0_329.1_30623.t1 | 8 | 1 | Ank_4 | 46 | 57 | 4.2e-07 | 30.3 | 1.1 | 2800.0 | -1.0 |
| pfu_aug2.0_329.1_30623.t1 | 6 | 1 | Ank_5 | 47 | 57 | 2.1e-06 | 27.7 | 3.7 | 9100.0 | -2.9 |
| pfu_aug2.0_329.1_30623.t1 | 5 | 1 | Ank | 48 | 89 | 1.6e-07 | 30.7 | 0.0044 | 11.0 | 6.0 |
| pfu_aug2.0_329.1_30623.t1 | 4 | 2 | Ank_2 | 74 | 179 | 2.7e-13 | 50.0 | 1.1e-06 | 0.0027 | 18.0 |
| pfu_aug2.0_329.1_30623.t1 | 8 | 2 | Ank_4 | 75 | 89 | 4.2e-07 | 30.3 | 2.3 | 5600.0 | -2.0 |
| pfu_aug2.0_329.1_30623.t1 | 6 | 2 | Ank_5 | 75 | 88 | 2.1e-06 | 27.7 | 2.5 | 6200.0 | -2.4 |
| pfu_aug2.0_329.1_30623.t1 | 5 | 2 | Ank | 107 | 143 | 1.6e-07 | 30.7 | 0.0024 | 6.0 | 6.8 |
| pfu_aug2.0_329.1_30623.t1 | 8 | 3 | Ank_4 | 128 | 148 | 4.2e-07 | 30.3 | 0.052 | 130.0 | 3.2 |
| pfu_aug2.0_329.1_30623.t1 | 6 | 3 | Ank_5 | 128 | 151 | 2.1e-06 | 27.7 | 0.028 | 70.0 | 3.8 |
| pfu_aug2.0_329.1_30623.t1 | 8 | 4 | Ank_4 | 200 | 214 | 4.2e-07 | 30.3 | 0.012 | 30.0 | 5.2 |
| pfu_aug2.0_329.1_30623.t1 | 6 | 4 | Ank_5 | 200 | 244 | 2.1e-06 | 27.7 | 3.8e-06 | 0.0095 | 16.1 |
| pfu_aug2.0_329.1_30623.t1 | 5 | 3 | Ank | 206 | 235 | 1.6e-07 | 30.7 | 0.0024 | 5.9 | 6.8 |
| pfu_aug2.0_329.1_30623.t1 | 4 | 3 | Ank_2 | 207 | 254 | 2.7e-13 | 50.0 | 6.1e-08 | 0.00015 | 22.0 |
| pfu_aug2.0_329.1_30623.t1 | 8 | 5 | Ank_4 | 218 | 254 | 4.2e-07 | 30.3 | 0.00016 | 0.4 | 11.2 |
| pfu_aug2.0_329.1_30623.t1 | 5 | 4 | Ank | 236 | 253 | 1.6e-07 | 30.7 | 0.13 | 330.0 | 1.3 |
| pfu_aug2.0_329.1_30623.t1 | 6 | 5 | Ank_5 | 433 | 453 | 2.1e-06 | 27.7 | 0.77 | 1900.0 | -0.7 |
| pfu_aug2.0_329.1_30623.t1 | 4 | 4 | Ank_2 | 440 | 491 | 2.7e-13 | 50.0 | 0.093 | 230.0 | 2.2 |
| pfu_aug2.0_329.1_30623.t1 | 5 | 5 | Ank | 442 | 480 | 1.6e-07 | 30.7 | 0.094 | 230.0 | 1.8 |
| pfu_aug2.0_329.1_30623.t1 | 8 | 6 | Ank_4 | 442 | 451 | 4.2e-07 | 30.3 | 4.8 | 12000.0 | -3.0 |
| pfu_aug2.0_329.1_30623.t1 | 8 | 7 | Ank_4 | 467 | 482 | 4.2e-07 | 30.3 | 6.0 | 15000.0 | -3.6 |
| pfu_aug2.0_329.1_30623.t1 | 8 | 8 | Ank_4 | 507 | 532 | 4.2e-07 | 30.3 | 0.21 | 510.0 | 1.3 |
| pfu_aug2.0_329.1_30623.t1 | 6 | 6 | Ank_5 | 510 | 536 | 2.1e-06 | 27.7 | 0.02 | 50.0 | 4.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_329.1_30623.t1 | gi|198427641|ref|XP_002121288.1| | PREDICTED: protein fem-1 homolog CG6966-like [Ciona intestinalis] | 5.0e-10 |
| pfu_aug2.0_329.1_30623.t1 | gi|470413526|ref|XP_004336589.1| | Ankyrin repeat containing protein, partial [Acanthamoeba castellanii str. Neff] | 2.0e-08 |
| pfu_aug2.0_329.1_30623.t1 | gi|189234829|ref|XP_001811696.1| | PREDICTED: protein fem-1 homolog CG6966 isoform X1 [Tribolium castaneum] | 4.0e-07 |
| pfu_aug2.0_329.1_30623.t1 | gi|642914546|ref|XP_008201723.1| | PREDICTED: protein fem-1 homolog CG6966 isoform X2 [Tribolium castaneum] | 4.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_329.1_30623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_329.1_30623.t1 atggcatctaaaagtaaagaaacccacatgacagaacgactccattttcttgtgagaggtggtaggtggtacgatgcacg agagaccctcaaggatttaccagtgcctgatcgccagaaacttgtcagtaataaaagccaaggagttacagccctttgtt gtgctgtggcctattacaagcctggggaaactgaaagtggggactctgattttctgtacttcataaggtacctattgaat gactgcaatgctgacttgaaccaaacttcattcctcaagtatgatatgcctggcctttctgttaggaacattgatgcctc tcctcttgctttagctctcatgaaagcagatagtaaggaatttaagaactcttcacagattcaccaggaacttgttcaac tgttcttagacaagggggtagatgtgtttagccgggaatcagagagcaggacaaagcttatgtttgtcaacaggattggt aagctatgtgaaatgctgctcgatcacttgcggtcaaaggcaaattttgacgaagaaaattctgccgacagtgtccaagg ttcagacggtaaatatgaagctttggtcacagattttgtgaatcagagagatgaaaatggtcatactgcactgcatcatg ctcagacaaaggaagtgtgtgacatgcttctccgtaatggggcaaaaagtaatattttagatgataatggaagcactcca cttgttgctgctgtaatcggaactcattatgaaatgctccagcaacaggcaaatggtgttatagagaaactaatggcttg ttctgctacggagaaggaaaaatttgatgtttatgaactgctggctgcaaatttattcacttttgaagcacatgatctct gcaatttcaaattcttgaacgatgatgacgatgaatttgatgtcacctctggtacacaggaaattagcaacgaaaaggca agatattatttgaaaaaagcctatcacccagaggagtctgatggttctgagagacttgagtccagagatagacgtgattt gtatggagagctagccattgaggacatgcttaaaagacggtttttggagggtgagaatcttacaattcaacagtgcctta tcttaggcatcctgattcaagaaagaattctgggagaaagtcatccacggacattgttcagcttgtacatactgcttact tggttgttcagttactgccaaagactacttgaaagtaacaaagcacacgattctataactgacaagcttcggctttttag gggagttctgaaggggcataatcttgagtacaactttctgcaaacggccctggacaaggccctgttccaaggtcgtaatg ggggtgtcaatgtcgcggaaagtgaaggtctgaagctgatgtccttgctgtacaggtgtggattctctccaaatgctaga tctccagtaggagagacacaactgagtttctactccagacttcgattccttcatacaggaggttcatcagagcgtgcatc attctgcttagggcttttggacttgatgttgaagaatggacttcatgccgatctcgttgacgagagaggaaaatctgtga tagaaattttacagaacaaaatcgatattagtgaggtgaaagaatgctcattgaaatgccttgcctctagggtcattgta aaatacaatattgactacacagggcaggtgcctggtgacctgtatgagttcatacagtaccatgatgttctgggaaagaa gtaa |
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Protein
| Protein ID | pfu_aug2.0_329.1_30623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_329.1_30623.t1 MASKSKETHMTERLHFLVRGGRWYDARETLKDLPVPDRQKLVSNKSQGVTALCCAVAYYKPGETESGDSDFLYFIRYLLN DCNADLNQTSFLKYDMPGLSVRNIDASPLALALMKADSKEFKNSSQIHQELVQLFLDKGVDVFSRESESRTKLMFVNRIG KLCEMLLDHLRSKANFDEENSADSVQGSDGKYEALVTDFVNQRDENGHTALHHAQTKEVCDMLLRNGAKSNILDDNGSTP LVAAVIGTHYEMLQQQANGVIEKLMACSATEKEKFDVYELLAANLFTFEAHDLCNFKFLNDDDDEFDVTSGTQEISNEKA RYYLKKAYHPEESDGSERLESRDRRDLYGELAIEDMLKRRFLEGENLTIQQCLILGILIQERILGESHPRTLFSLYILLT WLFSYCQRLLESNKAHDSITDKLRLFRGVLKGHNLEYNFLQTALDKALFQGRNGGVNVAESEGLKLMSLLYRCGFSPNAR SPVGETQLSFYSRLRFLHTGGSSERASFCLGLLDLMLKNGLHADLVDERGKSVIEILQNKIDISEVKECSLKCLASRVIV KYNIDYTGQVPGDLYEFIQYHDVLGKK |
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