Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_329.1_30628
Locus scaffold329.1 : 117926 ... 162885 : -
To GenomeBrowser scaffold329.1:117926..162885
Genes list of scaffold scaffold329.1
Synonym pfu_aug1.0_16943.1_61660

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_329.1_30628.t1 2 1 ANF_receptor 20 181 2.6e-25 88.9 2.6e-26 7.6e-23 80.8
pfu_aug2.0_329.1_30628.t1 2 2 ANF_receptor 206 272 2.6e-25 88.9 0.00028 0.82 8.3
pfu_aug2.0_329.1_30628.t1 1 1 Pkinase_Tyr 324 550 6.0e-26 91.0 3.2e-29 9.6e-26 90.3
pfu_aug2.0_329.1_30628.t1 1 1 Pkinase 335 533 2.5e-19 69.4 1.3e-22 3.9e-19 68.8
pfu_aug2.0_329.1_30628.t1 1 1 Guanylate_cyc 527 655 9.19994e-41 139.2 5.60519e-44 1.7e-40 138.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_329.1_30628.t1 gi|704556072|ref|XP_010181241.1| PREDICTED: atrial natriuretic peptide receptor 1-like, partial [Mesitornis unicolor] 0.0
pfu_aug2.0_329.1_30628.t1 gi|733912948|ref|XP_010718961.1| PREDICTED: atrial natriuretic peptide receptor 1-like [Meleagris gallopavo] 0.0
pfu_aug2.0_329.1_30628.t1 gi|700381511|ref|XP_009930599.1| PREDICTED: atrial natriuretic peptide receptor 1 [Opisthocomus hoazin] 0.0
pfu_aug2.0_329.1_30628.t1 gi|704319758|ref|XP_010168681.1| PREDICTED: atrial natriuretic peptide receptor 1, partial [Caprimulgus carolinensis] 0.0
pfu_aug2.0_329.1_30628.t1 gi|663288240|ref|XP_008500816.1| PREDICTED: atrial natriuretic peptide receptor 1 [Calypte anna] 0.0

Transcript
Transcript IDpfu_aug2.0_329.1_30628.t1
Definition-
>pfu_aug2.0_329.1_30628.t1
atggtttattcggaacagtactttaatgtaattagtttggcatatgagactcaagcgagtgctatatccataggtattga
agatgcacaggcctatggttatattacgaaccatacttggagcgttgagacagagtttgaagccgaagcttcgttgttag
ctgggaaggccgtggaaatgataaccgaaagcaacgttgacgtcataattggtcatccaagctccaaacgaaacattccc
attgcctatgtcacatcggcttacaacataccacacgttacatgggtggctaccagtaacacactgagcgacaaatcttt
gtttacaacgctgataagattgatgccaaatttcacatctgttgcggcggccgtcataagtatcttgaacttctttcaat
ggacgacagtctctatgcttatgcataatagcggagcactgtgtacgtatgctgcagatggaataacaagtgcaatcaca
aacacaaatatatctgtcaaggtgtatgccttgtttgatgatgccgctaactcggcccattttaggagcagactgttgga
gatcaaaaagttgaattatgccgaatggtacgatgaagccagtagaaacaggagtatatatctgaggtcccaaataccca
tacgaaatacctatcctccttggaacagttcctacctgatcgacaataacatgaatgcttcattattcagcatgaccctc
tatgatagcgcctaccttattgctatgtggtggcagcacgcattagacaataacatcgatgtaagggatggtggttccgg
gaaggttagattcaaggataatgctgatccggaccctatgttttggatagaagatctgaaagttgatggtaatgaaccaa
gagtcctgggtattgtagagtcctacaaaacacaagatcagcttcgcagtaagcagagtttggtttccaagagcaggaca
tcgatgtccgtactgactgcaaaggcggagtttaccggaagatacagaggacaactggtggcaattaaagcttcaagtca
gaaaatgatacggctcactcgaaaagatttgatagcgcttaaaaagatgagagagttcgtgcataacaacgtaaatccgt
ttgtaggagcatgtatagacgagccacatatttgcacagtgtttgcttttggacaaaaaggcacacttcaggaaatactg
gaaaatgatgacattaaattggaatggatgtttaaaatcgcacttatcaaagatcttgtatcgggaatgcagtatttaca
aagttccatactgaagactcatgggagactcaaaagttccaactgtgtaatagacggaagatggactcttaagataacag
attatgggatatcttcatttcgcacttcaatagatttgcgcagtttgatacagacagaagattatcacggcttactctgg
acagcacctgagcttttacgccttgagtatattccatcagaggggacacgactggcagatgtttacagttttggaatcat
cctccacgaaatatgctatagatcaggcgtattcccattccctatgctaagccctaaaggggatgcttacatggtagcca
gtggtctgcctgtccgtaatggtgataatcatgtcaaagaaatagctgacatggcattctgtcttctgagggacatacaa
ggatttgtcatcaaaggaatgccgctcaaagttgtccgtttacgaatagggctgcatactggaccagtttgtgcaggtgt
gattggtcttacaatgccacggtactgtctgtttggggatactgtgaatacggcatccaggatggagtctagtggattac
cacagaaaattcatgttacaactgaaactaaggaagctctagaaaaactgggcggttatgttttctgcgcacgtggtgaa
attgaagtcaagggaaaggggaagatgttcacattttggctcgagagcaaggaatcgtcagtaaatgtcccaagttcatc
tcaagaagttgaatga

Protein
Protein IDpfu_aug2.0_329.1_30628.t1
Definition-
>pfu_aug2.0_329.1_30628.t1
MVYSEQYFNVISLAYETQASAISIGIEDAQAYGYITNHTWSVETEFEAEASLLAGKAVEMITESNVDVIIGHPSSKRNIP
IAYVTSAYNIPHVTWVATSNTLSDKSLFTTLIRLMPNFTSVAAAVISILNFFQWTTVSMLMHNSGALCTYAADGITSAIT
NTNISVKVYALFDDAANSAHFRSRLLEIKKLNYAEWYDEASRNRSIYLRSQIPIRNTYPPWNSSYLIDNNMNASLFSMTL
YDSAYLIAMWWQHALDNNIDVRDGGSGKVRFKDNADPDPMFWIEDLKVDGNEPRVLGIVESYKTQDQLRSKQSLVSKSRT
SMSVLTAKAEFTGRYRGQLVAIKASSQKMIRLTRKDLIALKKMREFVHNNVNPFVGACIDEPHICTVFAFGQKGTLQEIL
ENDDIKLEWMFKIALIKDLVSGMQYLQSSILKTHGRLKSSNCVIDGRWTLKITDYGISSFRTSIDLRSLIQTEDYHGLLW
TAPELLRLEYIPSEGTRLADVYSFGIILHEICYRSGVFPFPMLSPKGDAYMVASGLPVRNGDNHVKEIADMAFCLLRDIQ
GFVIKGMPLKVVRLRIGLHTGPVCAGVIGLTMPRYCLFGDTVNTASRMESSGLPQKIHVTTETKEALEKLGGYVFCARGE
IEVKGKGKMFTFWLESKESSVNVPSSSQEVE

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495