Gene
| Gene Model ID | pfu_aug2.0_3293.1_12426 |
|---|---|
| Locus | scaffold3293.1 : 1222 ... 6035 : - |
| To GenomeBrowser | scaffold3293.1:1222..6035 |
| Genes list of scaffold | scaffold3293.1 |
| Synonym | pfu_aug1.0_188.1_14883 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3293.1_12426.t1 | 1 | 1 | NACHT | 214 | 377 | 4.1e-08 | 33.0 | 2.0e-11 | 1.5e-07 | 31.2 |
Transcript
| Transcript ID | pfu_aug2.0_3293.1_12426.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3293.1_12426.t1 atggcgacctcagatatgtttgccaggtgccatacagacgcacaaatccacaacaaactcatgacgtcactctgctgtga ctatctggaagaggatacatgcaaggacaggttcagaaaattcaaatcaaagtgtaggctctacttgacaactcctagag aaaagagtctgtctaccgcacaaggcatttgggattgcttagaaagcaagggcaagcttggagttggaaattatggtacc ctcagggaacttacttcagatgtcgacgtcgaaattacgtatataatagatgctgcaatgaataaaattgaccaacagga aggaaaaagaaattcaaaacgtctcaaactcgatggctcgatgaatgtttctggatcactagatacaaaaattgagcatc tgaaagagacactgttgaaaataaacaatttcattgttaagaaaaatcaaatatctccccttcaaaagcgagggaaagac atctgtgtggaccacttgtatgtacccgttaccatcaaagcggatactggttacaactataacccaaaatatggttctcc ccaagaaaaagatgaggagacaaagggaaagattataagtgaacttaaggatatgttgtacaaaaatggcgatcccgtga ggtatatctttatgcatggagaggctgcccgtgggaagacgttttattgcaaacaactactgaaatactggtataatgct aagctgaatggaccaagtagagatggactgtcggataatgagaaaattctcggtgaatttgactttacattcctcgtttc cttaagacatgttcatcagagcagaacattacttgaagatatgatatgttatgataccttaaaaaacaacaaagaatgcc atgatactatacgccatgttttatccagtgatcagtacaggtgcctcattctggttgacggtctggatgaatggagaata tcaaaaaataaatcattagagcttacccatgatggattgccgaatatcgaggccttctcggcttgtacatgtttcttcac gttgcgaccctcgagacttgattacgtagcaagtgcaatatatgattgtgacaaagttgtagaaatactgggtctagacg agaaagggcaaaatttaaaaataaggacgttgaagttgaagtccatccttgaggtaccgttattagctacaacatccacg atgttatggtacgaggggaaagaagtaggggatagtgccacgttcttttacttagcactcattcaattgctcattagaag atctttcgaacagcaggatttcaatgatatcgatctctatgcactaacaaatcacagacatccaggtttacatcgtttga atgtacttaatgtaccaaggttcaagacagtcagagagttctctagagttctgtcattattgggagaaatagcatataaa gatcttttatcggatgaaacgcatcttgtatttgaaaaagcagaactttacgataaacttaccaaagccgaattgaactt tgctttgaaggtaggacttttgagcaaaagcgaggcaccgggttgttttgacgaagaaaatgtgagtttgaatttttttc acaaatccattcaagaatttcttgcgtcattttatgtttcaacaacatgtgatttgaaattattgtgtacaaaactttca gacgttgaatccattcttgatttgtcgaatatttttgtttttacatcaggtttaagttcgtctctggcgagcgaattgtc ggaacatatcgtaagaattgccaataatgacagaaaaattcgttttgctcgagaaacattcaacggaaagaacgagcggg catcaaatttgcaatcactttttcttctccaattccgttgttatcaagaaatgaaatatggtaatatatcatcgtgtgat tctacctttcaaccaatcacgtttcatgttggagatatatatcttgtgtgtggaaatgacagagacattatcaaagaaac tgtagagataatgacacaccattacagcagtgtcgtgtcgctttatttgtggcatgtaccaagtactggagagcattgca ttagggatgagtttctgaacaaatttctcaagaatgcaagttctcttcagtatatatttgtacgaggagcttcagtaatt taccacatcaacgatgcaatacgtctaaaatccttgcatttattttccgtaagactatcacaagaagtgttacgtggatt gcataaatcaatttcgtcaaataaggaactgaaggcattaactttaaaatggatgaaatgtacaacgagtgacagtaagg aaaacaactcatcctactctttgatggatattttaagctgtctacctcaatgccctcatctttacatgcttacagtcaat tattcaacgttagattcagtttattctatgaggattttatttccacctatgctatcgcatcttacaaacttgcgtgaaat gtattatggtggactaacgttttatgatattttccttgaccattgtcctgacgctgccattcttgatacaatatcaaggc taccaaatttagagtgtatacgtctttatgaagtcaacgtaaagtactatgctatgcaacttaagatggcgtcaccatct ttgcaatacctggagctagatcatgtttgtttaggagatacgtcattggaaataagttctaatctatcaaaattaaacta tatttcgttgacagatgtcaatatgtcagctcagaactggaaaattttcatttcttctctgaagagattgagtcatgagt ttgatatctatatagcaagagcaaacattgatgagcgaattcttggaatgctaagggactcttcacactttttggaagtc aaaaaacatatttttgtgatttgcattttagacgatcaccgatga |
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Protein
| Protein ID | pfu_aug2.0_3293.1_12426.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3293.1_12426.t1 MATSDMFARCHTDAQIHNKLMTSLCCDYLEEDTCKDRFRKFKSKCRLYLTTPREKSLSTAQGIWDCLESKGKLGVGNYGT LRELTSDVDVEITYIIDAAMNKIDQQEGKRNSKRLKLDGSMNVSGSLDTKIEHLKETLLKINNFIVKKNQISPLQKRGKD ICVDHLYVPVTIKADTGYNYNPKYGSPQEKDEETKGKIISELKDMLYKNGDPVRYIFMHGEAARGKTFYCKQLLKYWYNA KLNGPSRDGLSDNEKILGEFDFTFLVSLRHVHQSRTLLEDMICYDTLKNNKECHDTIRHVLSSDQYRCLILVDGLDEWRI SKNKSLELTHDGLPNIEAFSACTCFFTLRPSRLDYVASAIYDCDKVVEILGLDEKGQNLKIRTLKLKSILEVPLLATTST MLWYEGKEVGDSATFFYLALIQLLIRRSFEQQDFNDIDLYALTNHRHPGLHRLNVLNVPRFKTVREFSRVLSLLGEIAYK DLLSDETHLVFEKAELYDKLTKAELNFALKVGLLSKSEAPGCFDEENVSLNFFHKSIQEFLASFYVSTTCDLKLLCTKLS DVESILDLSNIFVFTSGLSSSLASELSEHIVRIANNDRKIRFARETFNGKNERASNLQSLFLLQFRCYQEMKYGNISSCD STFQPITFHVGDIYLVCGNDRDIIKETVEIMTHHYSSVVSLYLWHVPSTGEHCIRDEFLNKFLKNASSLQYIFVRGASVI YHINDAIRLKSLHLFSVRLSQEVLRGLHKSISSNKELKALTLKWMKCTTSDSKENNSSYSLMDILSCLPQCPHLYMLTVN YSTLDSVYSMRILFPPMLSHLTNLREMYYGGLTFYDIFLDHCPDAAILDTISRLPNLECIRLYEVNVKYYAMQLKMASPS LQYLELDHVCLGDTSLEISSNLSKLNYISLTDVNMSAQNWKIFISSLKRLSHEFDIYIARANIDERILGMLRDSSHFLEV KKHIFVICILDDHR |
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