Gene
| Gene Model ID | pfu_aug2.0_33.1_10136 |
|---|---|
| Locus | scaffold33.1 : 112886 ... 127156 : + |
| To GenomeBrowser | scaffold33.1:112886..127156 |
| Genes list of scaffold | scaffold33.1 |
| Synonym | pfu_aug1.0_9599.1_53388 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger mynd domain-containing protein 19 | GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_33.1_10136.t1 | 1 | 1 | HNH_3 | 67 | 105 | 1.5e-07 | 30.6 | 4.8e-11 | 3.5e-07 | 29.4 |
| pfu_aug2.0_33.1_10136.t1 | 1 | 1 | zf-MYND | 180 | 216 | 4.1e-08 | 32.9 | 1.1e-11 | 8.4e-08 | 31.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_33.1_10136.t1 | gi|676435532|ref|XP_009047587.1| | hypothetical protein LOTGIDRAFT_139238 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_33.1_10136.t1 | gi|291243182|ref|XP_002741483.1| | PREDICTED: zinc finger MYND domain-containing protein 19-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_33.1_10136.t1 | gi|530598371|ref|XP_005292703.1| | PREDICTED: zinc finger MYND domain-containing protein 19 isoform X1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_33.1_10136.t1 | gi|197127732|gb|ACH44230.1| | putative MIZIP protein [Taeniopygia guttata] | 0.0 |
| pfu_aug2.0_33.1_10136.t1 | gi|126302663|ref|XP_001367230.1| | PREDICTED: zinc finger MYND domain-containing protein 19 isoform X1 [Monodelphis domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_33.1_10136.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10136.t1 atggcgggatttaagctgggaatcgtgtccctaggaaaagctgcgggaaaaatcaagtatgccttgctggacgagagaga tatttcactcgtggaacgttatatatttgaggccaaggtagaggtagacagggacggtaatggagctaatatcttcgcct gtatatatgatgtacatagaggaaaagacacaggaaaactcctacaccagttcttgtgggaaaagcattgtggtggcata gcagctggatggaaagtggttcacagaaacggtataaccgtggacaatcgtatcgaaaatctcactctagtcccagaaaa tacagtcctgaaggctacagaggatgtgccgaccaagagccgcgagcagagcgtttactggatggcagtcaagcagctac agaccgtaccattacaatgtcattatccctcaccctatcctatttacaacaagttctacagtcctaatggagaagatgta ttcttagaagacagcgatgtatgtatgtactatgaatgtcattatcccccttgtacaaatatggaaaaacaagttcggga attcagtatatgtggaaggtgtcaagaagtcaggtactgtggcacattctgccaacaaaaggactgggaagttcataaga agtactgtagagaaaaatggaaaaatccaaatattgttacagaatccctccctgaaagatag |
|
Protein
| Protein ID | pfu_aug2.0_33.1_10136.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10136.t1 MAGFKLGIVSLGKAAGKIKYALLDERDISLVERYIFEAKVEVDRDGNGANIFACIYDVHRGKDTGKLLHQFLWEKHCGGI AAGWKVVHRNGITVDNRIENLTLVPENTVLKATEDVPTKSREQSVYWMAVKQLQTVPLQCHYPSPYPIYNKFYSPNGEDV FLEDSDVCMYYECHYPPCTNMEKQVREFSICGRCQEVRYCGTFCQQKDWEVHKKYCREKWKNPNIVTESLPER |
|