Gene
| Gene Model ID | pfu_aug2.0_33.1_10138 |
|---|---|
| Locus | scaffold33.1 : 163736 ... 170424 : + |
| To GenomeBrowser | scaffold33.1:163736..170424 |
| Genes list of scaffold | scaffold33.1 |
| Synonym | pfu_aug1.0_925.1_07756 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tyrosine-protein kinase syk | GO:0016772 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_33.1_10138.t1 | 1 | 1 | Pkinase_Tyr | 54 | 324 | 0.0 | 221.5 | 0.0 | 0.0 | 220.6 |
| pfu_aug2.0_33.1_10138.t1 | 1 | 1 | Pkinase | 55 | 323 | 1.9e-37 | 128.8 | 5.19994e-41 | 2.6e-37 | 128.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_33.1_10138.t1 | gi|743710684|ref|XP_010948816.1| | PREDICTED: tyrosine-protein kinase SYK [Camelus bactrianus] | 4.06377e-44 |
| pfu_aug2.0_33.1_10138.t1 | gi|676467991|ref|XP_009058065.1| | hypothetical protein LOTGIDRAFT_105525, partial [Lottia gigantea] | 9.94922e-44 |
| pfu_aug2.0_33.1_10138.t1 | gi|612002900|ref|XP_007486278.1| | PREDICTED: tyrosine-protein kinase SYK-like [Monodelphis domestica] | 2.99878e-43 |
| pfu_aug2.0_33.1_10138.t1 | gi|704250244|ref|XP_010147675.1| | PREDICTED: activated CDC42 kinase 1-like, partial [Eurypyga helias] | 1.00053e-42 |
| pfu_aug2.0_33.1_10138.t1 | gi|488517989|ref|XP_004450957.1| | 3.00018e-42 |
Transcript
| Transcript ID | pfu_aug2.0_33.1_10138.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10138.t1 atgcctcaggccatggcaccaacaatcgataacaaaccagaggctaaaccagctccaccgactgtcctaccaccagcacc accaccagcaaggcccaaacagaaaccgacggagattctgggatttatcattccatcacctaagcttgaacagtatgagg acaagaggcttggacagggagagtttggttatgtgattaaagggaaattccgtcagatcaacaaccagtgggtagatgtg gccgtgaaaaaactgaagcacaacgaagagataaaggatgcatttgaggaggaagtcaataatatcggcacggctgagca tgaaaacattgtcaagttctatggctacatgagaaatcctgatatgtcaaaggtaggtcaaggtcatctagataacataa aaccaataacacattctagactgctgaatgtctgcatagatgtggcaaaggtaggtcaaggtcatctagataacataaaa cctgtgaaacatcctagactgctgaatatttgtatagatatgtcaaagggcatggactatctggcctccattaacatggt acatagtgatctagcagctcgaaatatactgctgactgatacatacaaggcaaaaatcacagactttggtttgtccaaga ctctgatggcaaataaagactactacagacgtcagagaaaatgtaaaataccggcattttatgtagcccctgagtacttt gcagaacagaaactatcggttaaaggagacgtatgggggtatggtgtgatgatgtgggagtgctttagtatgggagatat acctaatttgttcggtacggagactgagctaggtaaaatagcatatcatacactggaacaaggatccaggctttctaaac ctgatggttgcccagacagtgtgtatgacttaatgggtaaatgttggaaatgggagccagaattgagacctacgtttacg cagatacacgctcgatgtttgaacaaatga |
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Protein
| Protein ID | pfu_aug2.0_33.1_10138.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10138.t1 MPQAMAPTIDNKPEAKPAPPTVLPPAPPPARPKQKPTEILGFIIPSPKLEQYEDKRLGQGEFGYVIKGKFRQINNQWVDV AVKKLKHNEEIKDAFEEEVNNIGTAEHENIVKFYGYMRNPDMSKVGQGHLDNIKPITHSRLLNVCIDVAKVGQGHLDNIK PVKHPRLLNICIDMSKGMDYLASINMVHSDLAARNILLTDTYKAKITDFGLSKTLMANKDYYRRQRKCKIPAFYVAPEYF AEQKLSVKGDVWGYGVMMWECFSMGDIPNLFGTETELGKIAYHTLEQGSRLSKPDGCPDSVYDLMGKCWKWEPELRPTFT QIHARCLNK |
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