Gene
| Gene Model ID | pfu_aug2.0_33.1_10139 |
|---|---|
| Locus | scaffold33.1 : 189321 ... 206347 : - |
| To GenomeBrowser | scaffold33.1:189321..206347 |
| Genes list of scaffold | scaffold33.1 |
| Synonym | pfu_aug1.0_925.1_07757 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gata binding protein 4 | GO:0003007 GO:0005634 GO:0044212 GO:0045944 GO:0048729 GO:0048738 GO:0060429 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_33.1_10139.t2 | 3 | 1 | GATA | 253 | 259 | 7.2e-31 | 105.2 | 6.0 | 6400.0 | -3.4 |
| pfu_aug2.0_33.1_10139.t2 | 3 | 2 | GATA | 270 | 302 | 7.2e-31 | 105.2 | 2.5e-18 | 2.6e-15 | 55.4 |
| pfu_aug2.0_33.1_10139.t2 | 3 | 3 | GATA | 324 | 357 | 7.2e-31 | 105.2 | 2.2e-19 | 2.3e-16 | 58.8 |
Transcript
| Transcript ID | pfu_aug2.0_33.1_10139.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10139.t1 atggcatataccgatatctccacctggattaagaatcaaccattcaacatcaaggaagaaccagaacctgataatcaccg ttcctttggctatcccgtacccaggaacccccactccgtccctccgcagcacccttcccgccctgctgctgccaggcagg gcatgctgaatttccaggaaaacggtccactgctaccaaacgaagaagtagaagtgttcttcaatcacctggaaagaccg acagacatcagcgtatcagcgtccgtacatagtgatacagacagtgtagctgaatctcagagtaaagaccaacaagcacc tgccgttatgtttcagaatagcatgcacgccatgtctctcccatcgggcggagcagcgcccacataccacgagtctcccg gggcaaacagcttcatgcacccgagctccagcccagtctatgttcccaccacccgggctgtcctacctatgcagtatgtc agtaacggcagtgcccaggcagtatccacgcccagtggaagcccggctatgtggcccatgcagcccgactcttcatacag caccaccaactcccatccttccgtttctcccagatttgccttcgcgccctctcccaattctcccatcagttctcccgctg ccaggacagactccagctttaatacacctctcaggcccagcggacttagtccatatacagcatggagcccggagctgtca tggaactacaatatggccctccaacaaggtctccgccgatccggaccggatggccaagaatttttcgctgatttggaagg ccgtgagtgcgtcaactgtggtgctatttctactccattatggcgccgggacgggaccggtcattatttgtgtaacgcct gtggattatatcataagatgaatggaataaaccgtccccttataaagccccagaggcgattgggagaatttggagacact tatgcagccgcgcccccatatcaaacagcagacgcccatttacaggcatttggtccctggagtacaggagggaaagggct aggaaaatcacgatcagcgtccagaagagttggtttgtcatgcgcaaactgtcacacgacgaccactacactatggcgaa gaaacaacgagggtgaaccggtctgtaacgcatgcggactctactacaaattacacggggtaaatcgaccgttagcaatg aagaaagacggtatacagactagaaagcgaaaaccaaagaacctcgccaaaaacaaaaccccgaccaaatcagaacaagc agatgtaaaaccctcagtttctcccaattccatggcaacgagtcaaacaagccccatcagcacgccatctatgaacggat cagtttccaatataatgggacataactcatcaatgacttccttgacgtcacctggctcagaacatgagacttctttagcc agtcccgtaaatctagcatcagttccgcactattcgtcgccttctcctcctcgggcagttccggtaaaactcgagaatga caccatgcgcggccatggtgggactatgcattcagacggatctatgaacgcggttacagtgggtgccaattaa |
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| Transcript ID | pfu_aug2.0_33.1_10139.t2 |
| Definition | - |
>pfu_aug2.0_33.1_10139.t2 atggcatataccgatatctccacctggattaagaatcaaccattcaacatcaaggaagaaccagaacctgataatcaccg ttcctttggctatcccgtacccaggaacccccactccgtccctccgcagcacccttcccgccctgctgctgccaggcagg gcatgctgaatttccaggaaaacggtccactgctaccaaacgaagaagtagaagtgttcttcaatcacctggaaagaccg acagacatcagcgtatcagcgtccgtacatagtgatacagacagtgtagctgaatctcagagtaaagaccaacaagcacc tgccgttatgtttcagaatagcatgcacgccatgtctctcccatcgggcggagcagcgcccacataccacgagtctcccg gggcaaacagcttcatgcacccgagctccagcccagtctatgttcccaccacccgggctgtcctacctatgcagtatgtc agtaacggcagtgcccaggcagtatccacgcccagtggaagcccggctatgtggcccatgcagcccgactcttcatacag caccaccaactcccatccttccgtttctcccagatttgccttcgcgccctctcccaattctcccatcagttctcccgctg ccaggacagactccagctttaatacacctctcaggcccagcggacttagtccatatacagcatggagcccggagctgtca tggaactacaatatggccctccaacaaggtctccgccgatccggaccggatggccaagaatttttcgctgatttggaagg ccgtgagtgcgtcaactgtggtgctatttctactccattatggcgccgggacgggaccggtcattatttgtgtaacgcct gtggattatatcataagatgaatggaataaaccgtccccttataaagccccagaggcgattgtcagcgtccagaagagtt ggtttgtcatgcgcaaactgtcacacgacgaccactacactatggcgaagaaacaacgagggtgaaccggtctgtaacgc atgcggactctactacaaattacacggggtaaatcgaccgttagcaatgaagaaagacggtatacagactagaaagcgaa aaccaaagaacctcgccaaaaacaaaaccccgaccaaatcagaacaagcagatgtaaaaccctcagtttctcccaattcc atggcaacgagtcaaacaagccccatcagcacgccatctatgaacggatcagtttccaatataatgggacataactcatc aatgacttccttgacgtcacctggctcagaacatgagacttctttagccagtcccgtaaatctagcatcagttccgcact attcgtcgccttctcctcctcgggcagttccggtaaaactcgagaatgacaccatgcgcggccatggtgggactatgcat tcagacggatctatgaacgcggttacagtgggtgccaattaa |
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Protein
| Protein ID | pfu_aug2.0_33.1_10139.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10139.t1 MAYTDISTWIKNQPFNIKEEPEPDNHRSFGYPVPRNPHSVPPQHPSRPAAARQGMLNFQENGPLLPNEEVEVFFNHLERP TDISVSASVHSDTDSVAESQSKDQQAPAVMFQNSMHAMSLPSGGAAPTYHESPGANSFMHPSSSPVYVPTTRAVLPMQYV SNGSAQAVSTPSGSPAMWPMQPDSSYSTTNSHPSVSPRFAFAPSPNSPISSPAARTDSSFNTPLRPSGLSPYTAWSPELS WNYNMALQQGLRRSGPDGQEFFADLEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLGEFGDT YAAAPPYQTADAHLQAFGPWSTGGKGLGKSRSASRRVGLSCANCHTTTTTLWRRNNEGEPVCNACGLYYKLHGVNRPLAM KKDGIQTRKRKPKNLAKNKTPTKSEQADVKPSVSPNSMATSQTSPISTPSMNGSVSNIMGHNSSMTSLTSPGSEHETSLA SPVNLASVPHYSSPSPPRAVPVKLENDTMRGHGGTMHSDGSMNAVTVGAN |
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| Protein ID | pfu_aug2.0_33.1_10139.t2 |
| Definition | - |
>pfu_aug2.0_33.1_10139.t2 MAYTDISTWIKNQPFNIKEEPEPDNHRSFGYPVPRNPHSVPPQHPSRPAAARQGMLNFQENGPLLPNEEVEVFFNHLERP TDISVSASVHSDTDSVAESQSKDQQAPAVMFQNSMHAMSLPSGGAAPTYHESPGANSFMHPSSSPVYVPTTRAVLPMQYV SNGSAQAVSTPSGSPAMWPMQPDSSYSTTNSHPSVSPRFAFAPSPNSPISSPAARTDSSFNTPLRPSGLSPYTAWSPELS WNYNMALQQGLRRSGPDGQEFFADLEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRV GLSCANCHTTTTTLWRRNNEGEPVCNACGLYYKLHGVNRPLAMKKDGIQTRKRKPKNLAKNKTPTKSEQADVKPSVSPNS MATSQTSPISTPSMNGSVSNIMGHNSSMTSLTSPGSEHETSLASPVNLASVPHYSSPSPPRAVPVKLENDTMRGHGGTMH SDGSMNAVTVGAN |
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