Gene
| Gene Model ID | pfu_aug2.0_33.1_10142 |
|---|---|
| Locus | scaffold33.1 : 429396 ... 454102 : + |
| To GenomeBrowser | scaffold33.1:429396..454102 |
| Genes list of scaffold | scaffold33.1 |
| Synonym | pfu_aug1.0_9855.1_68105 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gtpase-activating rap ran-gap domain-like protein 3-like | GO:0005096 GO:0043547 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_33.1_10142.t1 | 2 | 1 | Rap_GAP | 137 | 178 | 0.0 | 188.4 | 0.52 | 3900.0 | -3.0 |
| pfu_aug2.0_33.1_10142.t1 | 2 | 2 | Rap_GAP | 235 | 422 | 0.0 | 188.4 | 0.0 | 0.0 | 187.1 |
| pfu_aug2.0_33.1_10142.t1 | 1 | 1 | CNH | 410 | 568 | 1.5e-26 | 93.4 | 3.0e-30 | 2.2e-26 | 92.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_33.1_10142.t1 | gi|676426143|ref|XP_009044529.1| | hypothetical protein LOTGIDRAFT_109410, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_33.1_10142.t1 | gi|556731418|ref|XP_005961394.1| | PREDICTED: GTPase-activating Rap/Ran-GAP domain-like protein 3-like isoform X2 [Pantholops hodgsonii] | 0.0 |
| pfu_aug2.0_33.1_10142.t1 | gi|585675466|ref|XP_006818781.1| | PREDICTED: GTPase-activating Rap/Ran-GAP domain-like protein 3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_33.1_10142.t1 | gi|556731416|ref|XP_005961393.1| | PREDICTED: GTPase-activating Rap/Ran-GAP domain-like protein 3-like isoform X1 [Pantholops hodgsonii] | 0.0 |
| pfu_aug2.0_33.1_10142.t1 | gi|573905977|ref|XP_006640709.1| | PREDICTED: GTPase-activating Rap/Ran-GAP domain-like protein 3-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_33.1_10142.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10142.t1 atggagatttttcgctccaaatcctatcacgaaactccgaaaagacctaaatggaaaagtagctccgcccgccagagggt tgtaaccttcagggactttgatttcttcagagtcagaagtttcagttcccctgcttcggatcacagcgtacgacgtgatg ttttcagcaggaggcattatggttccgttgagctgcttacaaatatggagggtgataataaagggcacagtgcagggagg ttcagggtggagacaggagaaagggatggagaggaggttacaaattccttgaatagtccaatacatttagagaatccaga atttcaaacacgatggtatttcaaatactttctaggaaaactgcaccaaacctatgtcgggatggatatagagaaagatc cgtttatcctttccgtcgtcgtaacagatgccaacaatcataatgttcctcagtatagagccatattatggagaaaaaat ggtgctacaagagtgtgccttccttaccaccctaacaagcctcaaactgtcaaaggaattctaagtcactttgaccttaa caaatttgacaaaggtccgaaggaaatttttgacccagagattcagaaagaggttctcgttctagaggagcaagaaggct ctgtgaatttcaagtttggggtactatatgccaaggatgaccaaagctcggacgacgatttctacggaaacgaagaaagc tgtccatcttttgacaaatttaccaaactccttggagagcgaattccacttcgaggctgggaaaaattcaagggtggttt agacgttaaaacgaattcaacgggtactgattctgtatatacagtttatgaaggccatgaaataatgttccacatttcaa ctttgttgccatattctaaagaaaacaaacaacaggtggagcggaagaggcacataggaaatgatattgtcaacatcctg ttttatgaaagtgactcacctaccatgccaccatttaagccatccatgatgaagtccagattcactcacatctttgccgt tgtttgttacaacaagaccgacaattcataccggttaaatattttctctgaggagtcggtgcctcttttcgggcctcctc tacccacacctccagtgtttacagaccatcatgaattccgggattttttacttgtcaagttgataaatggagagaaggcc gcagttaacaatcctctatttgctcaaaagcgggagaggacattagagatgcttatcaaaaacattcaccaagagtatat cacagaaataaacaaggaattacaggcatttgatgttcctcaaataataacccttatagatggcgcacgagatgatcacc aaatctgtattggctataagaaccagtatgatctcattaacgagaaaaacggcgacacactgcagctataccacgtgaac cttgtatctgccttggatatttatgaggatgaagaagccgagctactcctatgttacaattatgtcagtcattttcaacg gctgagtgaggagacgtgtacagattttgatttccaatggaacagtgagcctgaagccatagtttgtgccttcccatata tcatggctttcacgtcagataccatagaaatacggctgatcatcaacggcaatctactacatacaatgacaatgccaggg ttacattttattacatctaagagtgatatttactttgcctcattagctggtgtatcgccttctatgaaagataaggaaaa acgtcattctttcaccccaccctcctccccatcagccaaagcaactcatcacctacagagtatttataaaatcccgattt cgtgccttgccggacatattacatcgacagagaagacgcagcataccccgccctcgagccaaccctcaaccctcctagcc cctatcgtcagtaacggcgatagatcaccaacgactgtaaaaagaagtccccttttaaggtctaaatgtgttcagccatt acctttacccgtgaaggatcgacatgactcctccagctcagactctgggataagtatcgtgcgtcatcatgctgacgcca gtcccccggaaagtccctaccagaaagccgtgtgtcatatagacttcattgaacaagaatcccatattgtttga |
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Protein
| Protein ID | pfu_aug2.0_33.1_10142.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10142.t1 MEIFRSKSYHETPKRPKWKSSSARQRVVTFRDFDFFRVRSFSSPASDHSVRRDVFSRRHYGSVELLTNMEGDNKGHSAGR FRVETGERDGEEVTNSLNSPIHLENPEFQTRWYFKYFLGKLHQTYVGMDIEKDPFILSVVVTDANNHNVPQYRAILWRKN GATRVCLPYHPNKPQTVKGILSHFDLNKFDKGPKEIFDPEIQKEVLVLEEQEGSVNFKFGVLYAKDDQSSDDDFYGNEES CPSFDKFTKLLGERIPLRGWEKFKGGLDVKTNSTGTDSVYTVYEGHEIMFHISTLLPYSKENKQQVERKRHIGNDIVNIL FYESDSPTMPPFKPSMMKSRFTHIFAVVCYNKTDNSYRLNIFSEESVPLFGPPLPTPPVFTDHHEFRDFLLVKLINGEKA AVNNPLFAQKRERTLEMLIKNIHQEYITEINKELQAFDVPQIITLIDGARDDHQICIGYKNQYDLINEKNGDTLQLYHVN LVSALDIYEDEEAELLLCYNYVSHFQRLSEETCTDFDFQWNSEPEAIVCAFPYIMAFTSDTIEIRLIINGNLLHTMTMPG LHFITSKSDIYFASLAGVSPSMKDKEKRHSFTPPSSPSAKATHHLQSIYKIPISCLAGHITSTEKTQHTPPSSQPSTLLA PIVSNGDRSPTTVKRSPLLRSKCVQPLPLPVKDRHDSSSSDSGISIVRHHADASPPESPYQKAVCHIDFIEQESHIV |
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