Gene
| Gene Model ID | pfu_aug2.0_33.1_10144 |
|---|---|
| Locus | scaffold33.1 : 470865 ... 481765 : - |
| To GenomeBrowser | scaffold33.1:470865..481765 |
| Genes list of scaffold | scaffold33.1 |
| Synonym | pfu_aug1.0_538.1_36572 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium calcium exchanger 2-like | GO:0016020 GO:0030001 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_33.1_10144.t1 | 1 | 1 | Na_Ca_ex | 46 | 203 | 1.0e-24 | 86.7 | 4.8e-28 | 1.8e-24 | 85.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_33.1_10144.t1 | gi|699245617|ref|XP_009859504.1| | PREDICTED: sodium/calcium exchanger 2-like [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_33.1_10144.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10144.t1 atgtcgtcctcctgtgacctatcctcgtacacatgctccgacgtggggatgttattccccattgtcagtgagtacacatg gcctatcggaggaagagcttttatatatcttcttggactactatggagttttatggcagtgtcgatcattgcagacattt tcatgcaggctattgaaacaatcaccagtaaaacacaagacatcaaaataccagacaatgaaggcggctatcagacagtc caagtcaaattatggaacggcactgtcgctaacttgacactgatggcgctaggttcgagtgccccagaaatattattgac tgctatcaacacaatattcaatgacttcaaatcggaggcattgggccccagttgcattgttgggtctgcagcctttaact tgatggtgataacaggcgtttgtgtgatgtcagttccagagggcgaggttaggaagatagggcagcccaaggtgtttgct atcaccgccgtgttcagtgtgtttgcctatatttggctgatcatcatcttggtggttatcacccctgactacgtggacct ttgggaggcaatagtcacgttcttattcttccctattatggtgatcattgcatacatagcggataaagattactgtggga agaaaccaacggacgacaaggaggctctggaaatagatgttggtagagaagagatactgagtatcgtgtcagtgctgtcc gtagattccgttttatttacacctcaaagcaagagagaggaagcccttgctgcccgggctaagtttgtttccagtgaagg tgatcatattatgttcctgaacatttacagagcgtataaaggtgtaaaaggaaataaggactggtgtcatgaaaacttta taaatggtcgtaacatgaagacggccacggaggtacggcagcaattacgacagatctgtgagagacaagaaatacccata cagtcatgtgggaacgatacatcggctatcaggagatgtctggcagccgggttctttatgaatgcagcagagatacagaa ggagagctcaggatatgttacagtaagcttgatttacgcagaaattttattagtcgcctactggaaaagctga |
|
Protein
| Protein ID | pfu_aug2.0_33.1_10144.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10144.t1 MSSSCDLSSYTCSDVGMLFPIVSEYTWPIGGRAFIYLLGLLWSFMAVSIIADIFMQAIETITSKTQDIKIPDNEGGYQTV QVKLWNGTVANLTLMALGSSAPEILLTAINTIFNDFKSEALGPSCIVGSAAFNLMVITGVCVMSVPEGEVRKIGQPKVFA ITAVFSVFAYIWLIIILVVITPDYVDLWEAIVTFLFFPIMVIIAYIADKDYCGKKPTDDKEALEIDVGREEILSIVSVLS VDSVLFTPQSKREEALAARAKFVSSEGDHIMFLNIYRAYKGVKGNKDWCHENFINGRNMKTATEVRQQLRQICERQEIPI QSCGNDTSAIRRCLAAGFFMNAAEIQKESSGYVTVSLIYAEILLVAYWKS |
|