Gene
| Gene Model ID | pfu_aug2.0_33.1_10146 |
|---|---|
| Locus | scaffold33.1 : 512086 ... 513191 : + |
| To GenomeBrowser | scaffold33.1:512086..513191 |
| Genes list of scaffold | scaffold33.1 |
| Synonym | pfu_aug1.0_83907.1_13300 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_33.1_10146.t1 | 1 | 1 | rve | 63 | 170 | 8.6e-24 | 83.9 | 2.6e-27 | 1.3e-23 | 83.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_33.1_10146.t1 | gi|390356762|ref|XP_798464.2| | 0.0 | |
| pfu_aug2.0_33.1_10146.t1 | gi|499043269|ref|XP_004572237.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_33.1_10146.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10146.t1 atgcagaaggaaatactttcgagaattcataccggacatctagtaattacgaaatgccagcaaagagctaaggaaaccgt attttggatcggattgagtaagcaagttgagaacttggtgaaaaattgcgacaaatgtcaaatggttgcaaatgaccgtc cggaacctttgatgacaacgaatttacctagtaggccatgggagaagctaggtaccgatatgttcgagtacaaaggatca caatatctgctagtaatcgactattatccaagatatgtcgaagtcgcaaaactgacgagtacatcatcagaaacgattgt caaccatctgaagtcgatattctcccgccatggaataccggaagtactgcgtagcgacaacggaccgcaatatgcgtcaa aatattttgcggattttgcgagtcagtatggattctcacatgtgacatcaagtccccgatatccacaaagcaacggaaaa gccgaaagggccgtacaaacagtgaaaaatgtcatcaaaaagtcagatgatccatatttggcaataatggcatatagggc gacccctattcagagcggattctcgccaagcgaacttttgatggggagaaaaataagaacgactcttcccacagcgccaa aattattaaagccgataaatatcccagtgaacatagtaagagaaaacgaagcaaatcaaaaggcgaaacaaaaaagaatt atgacagaaaacatcgagtaa |
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Protein
| Protein ID | pfu_aug2.0_33.1_10146.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10146.t1 MQKEILSRIHTGHLVITKCQQRAKETVFWIGLSKQVENLVKNCDKCQMVANDRPEPLMTTNLPSRPWEKLGTDMFEYKGS QYLLVIDYYPRYVEVAKLTSTSSETIVNHLKSIFSRHGIPEVLRSDNGPQYASKYFADFASQYGFSHVTSSPRYPQSNGK AERAVQTVKNVIKKSDDPYLAIMAYRATPIQSGFSPSELLMGRKIRTTLPTAPKLLKPINIPVNIVRENEANQKAKQKRI MTENIE |
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