Gene
| Gene Model ID | pfu_aug2.0_33.1_10148 |
|---|---|
| Locus | scaffold33.1 : 538696 ... 553453 : - |
| To GenomeBrowser | scaffold33.1:538696..553453 |
| Genes list of scaffold | scaffold33.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_33.1_10148.t1 | 1 | 1 | Dpy19 | 13 | 407 | 0.0 | 309.9 | 0.0 | 0.0 | 309.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_33.1_10148.t1 | gi|676481016|ref|XP_009062243.1| | hypothetical protein LOTGIDRAFT_107140 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_33.1_10148.t1 | gi|524905792|ref|XP_005108258.1| | PREDICTED: probable C-mannosyltransferase DPY19L3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_33.1_10148.t1 | gi|530592661|ref|XP_005289953.1| | PREDICTED: probable C-mannosyltransferase DPY19L3 isoform X3 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_33.1_10148.t1 | gi|530592657|ref|XP_005289951.1| | PREDICTED: probable C-mannosyltransferase DPY19L3 isoform X1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_33.1_10148.t1 | gi|558153792|ref|XP_006121286.1| | PREDICTED: probable C-mannosyltransferase DPY19L3 isoform X1 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_33.1_10148.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10148.t1 atgatgtcagaaacatttgttattatcgttgtacatttgtatatggtactgttgacaatatttcagggagatgagatgac gccatgtagtataccagccaggttggttaaggttgtgatgtacagtctatttgtcttggttctaatgctggtctttaacc aagctgttaagtttgtgattaaccttgaagctgatgagcatatattcaaattcattatgtccaaatttggcattgcacat ggaagagactttgattccagactgtatctatgtattgatgcctttggatttttgagcttcgatacctatgaacgacttac tcgtggagttgtcttccctttgtatgttgtcactcacgttatactgctggttgtactattagtatcggctctacaaaatt ggagcaatcatgtacatgatggtagtgttaaggaccatacaagtccaaggaagtctcatttgttacatagtagaccagaa ctagcctatcacacagttttagctgtatttttcggtgctcttggtttatctacattacgaatgaaatacctatggacacc atacatgtgtgttctgggcagctttggtataagtgactataaaatgtggaaaagtgtgctcagtcagataaaagcacaag gtgttattgttcagattgttcgtcattttgcaacattgataacattggctgttttacttgccttggctttaccaccagcc cttaaggaactagaggaactgaaggagttttgggatcctgataccgtagacctcatggagtgggcaaagaaggaagtagc ccctggagcagcatttactggtagtatgcagttattagccggtgtaaagctgtgtacaggtcgtccaatcaccaatcatc cacattatgaagataaatacctcagatataaaactaaacagttgtatcagatgtatggtaggagatcaccagaggatgta cattccatactgagggagtataaatccagctatatcatcctggaggacagtatttgtatggcacctagtaaaggcaactg tagacttcctgatctcatagatatagacaatggcattattccagataatggaaaaatagagcctggtctagtcaaaagtt ctgtaccaagattttgtgatgaaattcgatataatggtacacaatatacaaagtatttcaaacttgttttttcaaatcga acattcagagtttatgaaatcctttaa |
|
Protein
| Protein ID | pfu_aug2.0_33.1_10148.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10148.t1 MMSETFVIIVVHLYMVLLTIFQGDEMTPCSIPARLVKVVMYSLFVLVLMLVFNQAVKFVINLEADEHIFKFIMSKFGIAH GRDFDSRLYLCIDAFGFLSFDTYERLTRGVVFPLYVVTHVILLVVLLVSALQNWSNHVHDGSVKDHTSPRKSHLLHSRPE LAYHTVLAVFFGALGLSTLRMKYLWTPYMCVLGSFGISDYKMWKSVLSQIKAQGVIVQIVRHFATLITLAVLLALALPPA LKELEELKEFWDPDTVDLMEWAKKEVAPGAAFTGSMQLLAGVKLCTGRPITNHPHYEDKYLRYKTKQLYQMYGRRSPEDV HSILREYKSSYIILEDSICMAPSKGNCRLPDLIDIDNGIIPDNGKIEPGLVKSSVPRFCDEIRYNGTQYTKYFKLVFSNR TFRVYEIL |
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