Gene
| Gene Model ID | pfu_aug2.0_33.1_10152 |
|---|---|
| Locus | scaffold33.1 : 611712 ... 639283 : - |
| To GenomeBrowser | scaffold33.1:611712..639283 |
| Genes list of scaffold | scaffold33.1 |
| Synonym | pfu_aug1.0_16856.1_69011 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| caspase-8 | GO:0004175 GO:0005515 GO:0005737 GO:0006508 GO:0008234 GO:0042981 GO:0043234 GO:0048522 GO:0048731 GO:0097191 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_33.1_10152.t1 | 1 | 1 | Peptidase_C14 | 40 | 262 | 1.2e-25 | 90.6 | 1.1e-29 | 1.6e-25 | 90.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_33.1_10152.t1 | gi|149755017|ref|XP_001496803.1| | PREDICTED: caspase-8 isoform X1 [Equus caballus] | 4.0e-30 |
| pfu_aug2.0_33.1_10152.t1 | gi|545191643|ref|XP_005601739.1| | PREDICTED: caspase-8 isoform X2 [Equus caballus] | 5.0e-30 |
| pfu_aug2.0_33.1_10152.t1 | gi|395823822|ref|XP_003785176.1| | 1.0e-29 | |
| pfu_aug2.0_33.1_10152.t1 | gi|528479049|ref|XP_005165273.1| | PREDICTED: caspase-8 [Danio rerio] | 3.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_33.1_10152.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10152.t1 atggttttggtacgagttggtagtaaggtatggtacgaagtggcaggtcatgatacagctgaacatccggacagaagaga tgctttaccaaagtatgatgtgaaagagagaaaaagaggaaaagttcttgtattttgtaacgtatctgtacaaaattgtc acgatttggatggatataagaaagatgcaggaaaattacaagagacttttacagagcttcagtttgaagtagacatcctg aacaacaaaaatcaggaatacatcctcaacgagttgcaaaaatgtaaggagatgaagccggaccagagcgccttcatctg ctgcttcctcagccatggcggttcagatgctgtcacaaaagagagctttttccttagctcggatggtaaagcgatttaca ttgaggatgtaatggcgatgtttacccatgagaactgtccaagtcttgtaggcaagcccaaaatattcctggtgcaagcc tgcagaggcacagaagaaaacaaaggtactgttgctgccaatatggggtacacgggtaccccacacctgattccaaactt ctcggattatctcctgtttaactctactgttcttactcacgtttcctgggtacacgaagatgaaggcagcttctttatta gaaatttctgcgaaaagatgaaagaacaccattcaaaatatgacatcatgactatttgcacgttagtgactggagccgta gctgcatgcggtaataaagatattaagcaggtcccggaaataaaaagcacactccgaaagctattatttctttga |
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Protein
| Protein ID | pfu_aug2.0_33.1_10152.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_33.1_10152.t1 MVLVRVGSKVWYEVAGHDTAEHPDRRDALPKYDVKERKRGKVLVFCNVSVQNCHDLDGYKKDAGKLQETFTELQFEVDIL NNKNQEYILNELQKCKEMKPDQSAFICCFLSHGGSDAVTKESFFLSSDGKAIYIEDVMAMFTHENCPSLVGKPKIFLVQA CRGTEENKGTVAANMGYTGTPHLIPNFSDYLLFNSTVLTHVSWVHEDEGSFFIRNFCEKMKEHHSKYDIMTICTLVTGAV AACGNKDIKQVPEIKSTLRKLLFL |
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