Gene
| Gene Model ID | pfu_aug2.0_331.1_04006 |
|---|---|
| Locus | scaffold331.1 : 121832 ... 156445 : - |
| To GenomeBrowser | scaffold331.1:121832..156445 |
| Genes list of scaffold | scaffold331.1 |
| Synonym | pfu_aug1.0_811.1_58265 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cullin-associated nedd8-dissociated protein partial | GO:0005654 GO:0005737 GO:0010265 GO:0016020 GO:0016567 GO:0017025 GO:0030154 GO:0031461 GO:0043086 GO:0045899 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_331.1_04006.t1 | 3 | 1 | HEAT_2 | 224 | 288 | 5.4e-07 | 29.7 | 2.3e-05 | 0.028 | 14.6 |
| pfu_aug2.0_331.1_04006.t1 | 4 | 1 | HEAT_EZ | 235 | 288 | 2.4e-07 | 31.0 | 1.0e-06 | 0.0013 | 19.1 |
| pfu_aug2.0_331.1_04006.t1 | 4 | 2 | HEAT_EZ | 276 | 318 | 2.4e-07 | 31.0 | 0.00068 | 0.84 | 10.2 |
| pfu_aug2.0_331.1_04006.t1 | 3 | 2 | HEAT_2 | 301 | 344 | 5.4e-07 | 29.7 | 0.022 | 27.0 | 5.1 |
| pfu_aug2.0_331.1_04006.t1 | 4 | 3 | HEAT_EZ | 325 | 352 | 2.4e-07 | 31.0 | 1.0 | 1300.0 | 0.0 |
| pfu_aug2.0_331.1_04006.t1 | 3 | 3 | HEAT_2 | 385 | 427 | 5.4e-07 | 29.7 | 0.019 | 23.0 | 5.3 |
| pfu_aug2.0_331.1_04006.t1 | 4 | 4 | HEAT_EZ | 388 | 422 | 2.4e-07 | 31.0 | 0.042 | 52.0 | 4.5 |
| pfu_aug2.0_331.1_04006.t1 | 1 | 1 | Amidase_2 | 560 | 642 | 1.5e-12 | 47.6 | 2.9e-15 | 3.6e-12 | 46.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_331.1_04006.t1 | gi|119617577|gb|EAW97171.1| | cullin-associated and neddylation-dissociated 1, isoform CRA_a, partial [Homo sapiens] | 0.0 |
| pfu_aug2.0_331.1_04006.t1 | gi|524911076|ref|XP_005110408.1| | PREDICTED: cullin-associated NEDD8-dissociated protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_331.1_04006.t1 | gi|74201306|dbj|BAE26109.1| | unnamed protein product [Mus musculus] | 0.0 |
| pfu_aug2.0_331.1_04006.t1 | gi|260811013|ref|XP_002600217.1| | hypothetical protein BRAFLDRAFT_118260 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_331.1_04006.t1 | gi|585664020|ref|XP_006811938.1| | PREDICTED: LOW QUALITY PROTEIN: cullin-associated NEDD8-dissociated protein 1-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_331.1_04006.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_331.1_04006.t1 atggcgagtgtgtcatatcacattgccaacttgttggaaaagagaaaaccgggaaaacagggtgctctggatttagtgaa caggacagtagcttacaatgaactgaatcacgaaaagactcgaactttgagcgagaaagtatcaaattttaaaggagatt cgaaaaagttaaatcaatttgtaaatgaactcacgggcacgaaatccgataacccgatgccaacctccgagagcaacaac gcacttgcagaagaattcgctgattatttcatgagcaaaattgacaaaattcggtacgaactgagggattttgaaaatta tgaggctgttacaaaagaggtaccttcattccggacattcaatgagttaacacaagacgaagtaaaaaagttgattggtg aattacaaactaaaacttgtcaattggatgtactaccgacaaatatttcaaaatcattcttgaatgaacctttaccttta ggtccattggtcaacaaagtgaaggaatttcaagtggaaaccatagtggacaccctatgtagtaacatgatctctgataa agaacaactgagggatatatcaagtatcggtttgaagacagtcattagtgagttacctccctcttccactgccttggctg ctagcatttgtaagaaaattacgggcaggcttaccagtgcaatatcaaagcaagaggatgtttctgtacagctagaagcc ttggatatactaggtgacttgcttagtagatttggaggtttgttgattagttttcatcccagcataatgcagactttgct accacagttgtcaagtcccagacttgcagtacggaaaagagctattctagcaataggttcccttgtgatgagctgtaata acacactgttcaacgagctgatagaatttttgttagcggagctactgaagaattcttcaacgtcaacgaccagaaccttc atacaatgtgtgggagctataagatgtccgaaggaaatttccccttttgtttcagagattatcaagatatgtttggtgta cctatgtcatgatcctaactataattatgatgatgatgacgacgacagtgccatggagacagaagaggatgatgaagatg atgatgatgatgaggagtacagtgatgacgatgatatgagttggaaggtacggagggccgctgctaagtgtgtagacgct atcatagccaccaggcatgaaatgctgatggaattctacaaaaatgtctctccggctcttatagctagattcaaagaacg tgaagaaaatgtgaaagctgatattttccatgcgtacattacactattacgacagacaagacctacgatgtcatcatcag atcctgatgccatggatcaagatggcggaaaattcatccaatctaatcaaaatctacacgtgagttgtgacgataactca gaattacgaggaacaagtagtgattctctatgtaccgctcagggtggacaatgtcaggaggatagtctgtcgtgctcagg ttcctatcacactggtctttgctcaggccacgcctcaaggcgatgctgcgtcggaacagaagttcatggatcgtcggatt gtagcggagtcaaaatatatccaaggagtagctggggtgcacgaagtcctaaacatgaaacgtcaatgagtagccataat cccgtaaacatgttcttcatccatcacacagatgggatttcttgtaaggactttgattcctgtgctcggatattgagagg aatccaaaatttccatatggacgatagaggttggtctgacattgggtatagctttttagttggtgaagatggcaatgttt acgagggacgtggctggaatatccaaggtgcacatacccaaggttgtaactcggtatcctacgctgcctctgttatggga gacttcacnatctatggtgcagatatcatgcaatag |
|
Protein
| Protein ID | pfu_aug2.0_331.1_04006.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_331.1_04006.t1 MASVSYHIANLLEKRKPGKQGALDLVNRTVAYNELNHEKTRTLSEKVSNFKGDSKKLNQFVNELTGTKSDNPMPTSESNN ALAEEFADYFMSKIDKIRYELRDFENYEAVTKEVPSFRTFNELTQDEVKKLIGELQTKTCQLDVLPTNISKSFLNEPLPL GPLVNKVKEFQVETIVDTLCSNMISDKEQLRDISSIGLKTVISELPPSSTALAASICKKITGRLTSAISKQEDVSVQLEA LDILGDLLSRFGGLLISFHPSIMQTLLPQLSSPRLAVRKRAILAIGSLVMSCNNTLFNELIEFLLAELLKNSSTSTTRTF IQCVGAIRCPKEISPFVSEIIKICLVYLCHDPNYNYDDDDDDSAMETEEDDEDDDDDEEYSDDDDMSWKVRRAAAKCVDA IIATRHEMLMEFYKNVSPALIARFKEREENVKADIFHAYITLLRQTRPTMSSSDPDAMDQDGGKFIQSNQNLHVSCDDNS ELRGTSSDSLCTAQGGQCQEDSLSCSGSYHTGLCSGHASRRCCVGTEVHGSSDCSGVKIYPRSSWGARSPKHETSMSSHN PVNMFFIHHTDGISCKDFDSCARILRGIQNFHMDDRGWSDIGYSFLVGEDGNVYEGRGWNIQGAHTQGCNSVSYAASVMG DFXIYGADIMQ |
|