Gene
| Gene Model ID | pfu_aug2.0_3331.1_05808 |
|---|---|
| Locus | scaffold3331.1 : 41583 ... 65431 : - |
| To GenomeBrowser | scaffold3331.1:41583..65431 |
| Genes list of scaffold | scaffold3331.1 |
| Synonym | pfu_aug1.0_81050.1_05955 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3331.1_05808.t1 | 5 | 1 | zf-B_box | 5 | 51 | 1.2e-17 | 63.5 | 9.8e-10 | 4.8e-06 | 26.3 |
| pfu_aug2.0_3331.1_05808.t1 | 5 | 2 | zf-B_box | 63 | 106 | 1.2e-17 | 63.5 | 2.3e-09 | 1.1e-05 | 25.1 |
| pfu_aug2.0_3331.1_05808.t1 | 5 | 3 | zf-B_box | 123 | 164 | 1.2e-17 | 63.5 | 1.4e-05 | 0.067 | 13.0 |
| pfu_aug2.0_3331.1_05808.t1 | 5 | 4 | zf-B_box | 179 | 224 | 1.2e-17 | 63.5 | 2.8e-07 | 0.0014 | 18.4 |
| pfu_aug2.0_3331.1_05808.t1 | 5 | 5 | zf-B_box | 305 | 316 | 1.2e-17 | 63.5 | 0.01 | 51.0 | 3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3331.1_05808.t1 | gi|260835494|ref|XP_002612743.1| | hypothetical protein BRAFLDRAFT_97277 [Branchiostoma floridae] | 7.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_3331.1_05808.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3331.1_05808.t1 gaacgtggtcctaatcgtcactgtggccagtgtaaagaactgaacaaagtcgagaaagcagtatcattctgcgtggactg caatgaacctctatgtgacggatgtgacaagcagcatagagcaataaaggcgaccaaaatgcacaatgttgtcggtattg acgaagtagacgaggatgaaaaatacaaccatcaatgtggacaatgcaaggaaatgagcttggtgaaagaagccgtctct ttctgcaaagaatgtaaggaacctctgtgccaagattgtgataaacaacacagggttttgaaaccaactaaaagccatgt tcttgttgggatcaacgtaattgaaaaggatgaaaactgtcaatatcaatgtggacagtgtaaagaaatggacgtggtaa aggaagctgtgtcgttctgcaaagactgcaaatacccactttgccaggaatgtagttgccgacataaggttgttaaatca actaagcaccatgttgtagttgggattgacgaaattgaagaggatcaagaaagaggtcatttatgcagtgaatgtaaaga atatggaaagaatgaagaagcagttaccttctgtaatacctgtctggagactttgtgtagtgcatgtgaaaaacaacaca agagaatgaaggcgacaatgagccatgatttacttcatatcaatgagatagcacagtcgctgttcaaccatagtgagtgg gattttgactctagtgtggtttttaataactggtcaaatgagcagatagatcaaacggctgcagacgatgaggagataag agtgtcgtatactgacattcctgagagcggtgatcagagccaaggtgacggtggagatgggggcgattcaggacaaagag aggaccgcataccggaagtaagcgatgcaggatgtggtcattgtttctgtaatccatgtgttacaacaaatagacagagt tggatggggaacggtgcattaccacatgcacggaattctgcaatacggaaaaagaagtataaaaagttttggacgatgat gttacgaagaaatgcttggaaccaccctctttaccttcagaagaaagcaaacatgttgaactggaatgccatcgactccg agagaattgtttggacactaagggaagtacatgtaatgccagattgcgttttaactgtagtgagggaactctatcccaat ccacctggtcagctgtacatgggacataagtggatataa |
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Protein
| Protein ID | pfu_aug2.0_3331.1_05808.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3331.1_05808.t1 ERGPNRHCGQCKELNKVEKAVSFCVDCNEPLCDGCDKQHRAIKATKMHNVVGIDEVDEDEKYNHQCGQCKEMSLVKEAVS FCKECKEPLCQDCDKQHRVLKPTKSHVLVGINVIEKDENCQYQCGQCKEMDVVKEAVSFCKDCKYPLCQECSCRHKVVKS TKHHVVVGIDEIEEDQERGHLCSECKEYGKNEEAVTFCNTCLETLCSACEKQHKRMKATMSHDLLHINEIAQSLFNHSEW DFDSSVVFNNWSNEQIDQTAADDEEIRVSYTDIPESGDQSQGDGGDGGDSGQREDRIPEVSDAGCGHCFCNPCVTTNRQS WMGNGALPHARNSAIRKKKYKKFWTMMLRRNAWNHPLYLQKKANMLNWNAIDSERIVWTLREVHVMPDCVLTVVRELYPN PPGQLYMGHKWI |
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