Gene
Gene Model ID | pfu_aug2.0_3347.1_25725 |
---|---|
Locus | scaffold3347.1 : 59668 ... 61532 : - |
To GenomeBrowser | scaffold3347.1:59668..61532 |
Genes list of scaffold | scaffold3347.1 |
Synonym | pfu_aug1.0_197.1_22064 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_3347.1_25725.t1 | 3 | 1 | zf-B_box | 17 | 59 | 3.4e-11 | 42.8 | 2.7e-08 | 3.4e-05 | 23.6 |
pfu_aug2.0_3347.1_25725.t1 | 3 | 2 | zf-B_box | 76 | 112 | 3.4e-11 | 42.8 | 3.2e-10 | 4.0e-07 | 29.8 |
pfu_aug2.0_3347.1_25725.t1 | 5 | 1 | SGL | 90 | 158 | 3.4e-06 | 26.6 | 0.37 | 460.0 | -0.1 |
pfu_aug2.0_3347.1_25725.t1 | 3 | 3 | zf-B_box | 262 | 287 | 3.4e-11 | 42.8 | 3.7 | 4600.0 | -2.4 |
pfu_aug2.0_3347.1_25725.t1 | 5 | 2 | SGL | 306 | 400 | 3.4e-06 | 26.6 | 0.0012 | 1.4 | 8.1 |
pfu_aug2.0_3347.1_25725.t1 | 5 | 1 | NHL | 381 | 392 | 9.5e-07 | 28.4 | 0.23 | 290.0 | 1.7 |
pfu_aug2.0_3347.1_25725.t1 | 5 | 3 | SGL | 409 | 469 | 3.4e-06 | 26.6 | 0.0084 | 10.0 | 5.3 |
pfu_aug2.0_3347.1_25725.t1 | 5 | 2 | NHL | 416 | 431 | 9.5e-07 | 28.4 | 0.18 | 220.0 | 2.0 |
pfu_aug2.0_3347.1_25725.t1 | 5 | 3 | NHL | 465 | 480 | 9.5e-07 | 28.4 | 2.1 | 2500.0 | -1.3 |
pfu_aug2.0_3347.1_25725.t1 | 5 | 4 | SGL | 512 | 550 | 3.4e-06 | 26.6 | 0.0029 | 3.6 | 6.8 |
pfu_aug2.0_3347.1_25725.t1 | 5 | 4 | NHL | 514 | 535 | 9.5e-07 | 28.4 | 0.00013 | 0.16 | 11.9 |
pfu_aug2.0_3347.1_25725.t1 | 5 | 5 | NHL | 555 | 571 | 9.5e-07 | 28.4 | 4.2e-05 | 0.052 | 13.5 |
pfu_aug2.0_3347.1_25725.t1 | 5 | 5 | SGL | 556 | 575 | 3.4e-06 | 26.6 | 0.045 | 55.0 | 3.0 |
Transcript
Transcript ID | pfu_aug2.0_3347.1_25725.t1 |
---|---|
Definition | - |
>pfu_aug2.0_3347.1_25725.t1 atggcggagggtttcagtcttccattacaatttccccagacgacagtggaatgtgagaaatgcagtgctgacgttgatgt cacgtggttttgtaagaactgtcctgcctccctctgcaataactgcaaagaagaccattccagagataaactgatgagaa agcatgaagtggtaccaagatctggaagcgtattaaggtcccatggatcatggaaagtgagagaatcatgtaaaatgcac aaaaacagtgatttaataacttactgtaatgattgtaaagaaccatgttgtattgattgtatggaagaaaaacatcatcg ccatgctttcacaaaacttgatacgaaatatttcgaagccgagtctcgccttaactttctggtagatgttctgtcaaaat ctacgatactaaccattcaaaatgagatttcaagtttgaaacaaaatattgaaactttcaatgaaaatttcaatctcgtg aatacagaattaaacacagctgagaacaaagttatgacaactgtcgcagagtcttttaaaaaattacgcaaaaatctgtc tgtgaaacaaaaggaattagtatctaaaagagaggatagaatcaaacgatgtggccatcagatgaatgaaattgaaagtt tcattgcaagtactgaacagaaaattagggcagggggtctggatctgatagagtactttcctatccttcctaccctccag tcattccactctgacataaccactcctgttccttgctttgaattaaatgaagccattctgaacgaatgtgaaacaaacat agggcagctatgttttcaagatagaaaatctgattcaagtcacgaatcattacacaatgttagtgttagtaataaagaga aaaatgacgaatctgtggaaacggataaagagggggtaagtgtatctggcattaaagaagaaaagatagatagtttcaaa acacctatttctatttcgagtatagaacctgtaggtgatggcacagcatggattgcaagtgttgaaagtgacacaatgta tctatatgacatcagaggtaaagagataaggtcagttataatgaagggacagagaggattcttaaaaaaagcgaaaaaga tagagatttacgacatggttttacagagcaatggtgatattgtagtggcatgctttgacgacaaggtaagacgtgtgtca gttagtggtaagataactactctaattgacacaacaccatttatcccttatggagtgtgtctgacagacagggaggagat agtagtatgtatggcaggtcagaaggacaaaaaccacgtggctgtgtatacacctgacggtaagtcaaaggtaagggaga taacagctagagatagtaacaacaagcagttgtttaccggaccagattgtttagttatcaatgacggtcagataacagtg ttgaacggcgctgagaacgttgtgtccttggatcaacacagtggtaaggtactctgggtgtatgatggtagtcaggcttc acttaaagagaactttgatccctcaggaatctgtaaggataacttctcaaatattcttgtcactgattatgaaaaccatt gtattcattatatcaacaagaaaggaagtttgataagcattataatggttaaagattatggattaaaaaacccatgggga atatgtgtggacagtcagagtggaaatatatggtgtgggaatacagaagacaaagttctgttactgaaatatccaagata a |
Protein
Protein ID | pfu_aug2.0_3347.1_25725.t1 |
---|---|
Definition | - |
>pfu_aug2.0_3347.1_25725.t1 MAEGFSLPLQFPQTTVECEKCSADVDVTWFCKNCPASLCNNCKEDHSRDKLMRKHEVVPRSGSVLRSHGSWKVRESCKMH KNSDLITYCNDCKEPCCIDCMEEKHHRHAFTKLDTKYFEAESRLNFLVDVLSKSTILTIQNEISSLKQNIETFNENFNLV NTELNTAENKVMTTVAESFKKLRKNLSVKQKELVSKREDRIKRCGHQMNEIESFIASTEQKIRAGGLDLIEYFPILPTLQ SFHSDITTPVPCFELNEAILNECETNIGQLCFQDRKSDSSHESLHNVSVSNKEKNDESVETDKEGVSVSGIKEEKIDSFK TPISISSIEPVGDGTAWIASVESDTMYLYDIRGKEIRSVIMKGQRGFLKKAKKIEIYDMVLQSNGDIVVACFDDKVRRVS VSGKITTLIDTTPFIPYGVCLTDREEIVVCMAGQKDKNHVAVYTPDGKSKVREITARDSNNKQLFTGPDCLVINDGQITV LNGAENVVSLDQHSGKVLWVYDGSQASLKENFDPSGICKDNFSNILVTDYENHCIHYINKKGSLISIIMVKDYGLKNPWG ICVDSQSGNIWCGNTEDKVLLLKYPR |