Gene
| Gene Model ID | pfu_aug2.0_3349.1_32451 |
|---|---|
| Locus | scaffold3349.1 : 12444 ... 16665 : - |
| To GenomeBrowser | scaffold3349.1:12444..16665 |
| Genes list of scaffold | scaffold3349.1 |
| Synonym | pfu_aug1.0_4501.1_23588 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3349.1_32451.t1 | 3 | 1 | EF-hand_6 | 1 | 29 | 3.0e-20 | 70.2 | 1.5e-10 | 2.0e-07 | 30.3 |
| pfu_aug2.0_3349.1_32451.t1 | 3 | 1 | EF-hand_5 | 1 | 24 | 4.7e-14 | 50.9 | 3.6e-08 | 4.8e-05 | 22.4 |
| pfu_aug2.0_3349.1_32451.t1 | 2 | 1 | EF-hand_7 | 2 | 59 | 4.1e-23 | 81.2 | 3.9e-13 | 5.3e-10 | 39.3 |
| pfu_aug2.0_3349.1_32451.t1 | 4 | 1 | EF-hand_1 | 2 | 27 | 1.0e-19 | 68.2 | 1.6e-08 | 2.1e-05 | 23.4 |
| pfu_aug2.0_3349.1_32451.t1 | 2 | 1 | EF-hand_9 | 3 | 45 | 1.9e-06 | 27.7 | 5.0e-06 | 0.0067 | 16.3 |
| pfu_aug2.0_3349.1_32451.t1 | 4 | 1 | EF-hand_8 | 4 | 20 | 9.4e-14 | 50.7 | 0.0046 | 6.2 | 6.5 |
| pfu_aug2.0_3349.1_32451.t1 | 4 | 2 | EF-hand_8 | 25 | 47 | 9.4e-14 | 50.7 | 0.033 | 44.0 | 3.7 |
| pfu_aug2.0_3349.1_32451.t1 | 3 | 2 | EF-hand_6 | 46 | 61 | 3.0e-20 | 70.2 | 0.021 | 29.0 | 4.9 |
| pfu_aug2.0_3349.1_32451.t1 | 4 | 2 | EF-hand_1 | 46 | 62 | 1.0e-19 | 68.2 | 0.0015 | 2.0 | 7.8 |
| pfu_aug2.0_3349.1_32451.t1 | 3 | 2 | EF-hand_5 | 48 | 55 | 4.7e-14 | 50.9 | 1.9 | 2500.0 | -2.0 |
| pfu_aug2.0_3349.1_32451.t1 | 4 | 3 | EF-hand_8 | 48 | 93 | 9.4e-14 | 50.7 | 3.3e-07 | 0.00044 | 19.8 |
| pfu_aug2.0_3349.1_32451.t1 | 2 | 2 | EF-hand_7 | 73 | 133 | 4.1e-23 | 81.2 | 8.3e-15 | 1.1e-11 | 44.6 |
| pfu_aug2.0_3349.1_32451.t1 | 3 | 3 | EF-hand_6 | 73 | 99 | 3.0e-20 | 70.2 | 1.1e-10 | 1.5e-07 | 30.7 |
| pfu_aug2.0_3349.1_32451.t1 | 4 | 3 | EF-hand_1 | 74 | 100 | 1.0e-19 | 68.2 | 2.2e-10 | 2.9e-07 | 29.2 |
| pfu_aug2.0_3349.1_32451.t1 | 3 | 3 | EF-hand_5 | 74 | 97 | 4.7e-14 | 50.9 | 1.4e-09 | 1.9e-06 | 26.9 |
| pfu_aug2.0_3349.1_32451.t1 | 2 | 2 | EF-hand_9 | 77 | 131 | 1.9e-06 | 27.7 | 0.00058 | 0.78 | 9.7 |
| pfu_aug2.0_3349.1_32451.t1 | 4 | 4 | EF-hand_8 | 86 | 132 | 9.4e-14 | 50.7 | 3.3e-11 | 4.5e-08 | 32.5 |
| pfu_aug2.0_3349.1_32451.t1 | 4 | 4 | EF-hand_1 | 109 | 132 | 1.0e-19 | 68.2 | 6.1e-05 | 0.082 | 12.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3349.1_32451.t1 | gi|524886181|ref|XP_005099688.1| | PREDICTED: calmodulin-like isoform X2 [Aplysia californica] | 7.00649e-43 |
| pfu_aug2.0_3349.1_32451.t1 | gi|585667601|ref|XP_002735410.2| | PREDICTED: calmodulin-like, partial [Saccoglossus kowalevskii] | 7.00649e-43 |
Transcript
| Transcript ID | pfu_aug2.0_3349.1_32451.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3349.1_32451.t1 atgaaagaggtgtttagtcttttcgatcatgactgcgacggatttttagacattaaagaacttggaaaagttctgagatc attcggactaaatccatcggaagcagaacttgaagagatgatcactgaatacgaagaagatgatggcaaaatggattttc ctgaagtcatgaaaattttggccaagaagataaaagaaccaccagaaacagaagaatacctgcgtgaagcttttaggaca ttcgataaagacggaagcggggtcataagtagaatagaacttcagcaaataatgagcaaccaaggggaaaaactttcaga acacgaagttcaggaaatgatggctgatgcagatgatggcaaaggggaggtacattatgaagacttcatcaagcttatct taggaaaagtgtag |
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Protein
| Protein ID | pfu_aug2.0_3349.1_32451.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3349.1_32451.t1 MKEVFSLFDHDCDGFLDIKELGKVLRSFGLNPSEAELEEMITEYEEDDGKMDFPEVMKILAKKIKEPPETEEYLREAFRT FDKDGSGVISRIELQQIMSNQGEKLSEHEVQEMMADADDGKGEVHYEDFIKLILGKV |
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