Gene
| Gene Model ID | pfu_aug2.0_3349.1_32454 |
|---|---|
| Locus | scaffold3349.1 : 40100 ... 46595 : - |
| To GenomeBrowser | scaffold3349.1:40100..46595 |
| Genes list of scaffold | scaffold3349.1 |
| Synonym | pfu_aug1.0_4501.1_23593 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3349.1_32454.t1 | 3 | 1 | EF-hand_5 | 61 | 68 | 8.2e-06 | 24.9 | 0.53 | 1100.0 | -0.8 |
| pfu_aug2.0_3349.1_32454.t1 | 3 | 1 | EF-hand_1 | 64 | 68 | 1.0e-07 | 30.7 | 2.9 | 6200.0 | -3.0 |
| pfu_aug2.0_3349.1_32454.t1 | 1 | 1 | EF-hand_8 | 73 | 103 | 3.3e-07 | 29.8 | 1.5e-10 | 3.3e-07 | 29.8 |
| pfu_aug2.0_3349.1_32454.t1 | 3 | 2 | EF-hand_1 | 76 | 102 | 1.0e-07 | 30.7 | 4.8e-11 | 1.0e-07 | 30.7 |
| pfu_aug2.0_3349.1_32454.t1 | 3 | 2 | EF-hand_5 | 79 | 100 | 8.2e-06 | 24.9 | 3.9e-09 | 8.2e-06 | 24.9 |
| pfu_aug2.0_3349.1_32454.t1 | 3 | 3 | EF-hand_1 | 102 | 107 | 1.0e-07 | 30.7 | 0.24 | 510.0 | 0.4 |
| pfu_aug2.0_3349.1_32454.t1 | 3 | 3 | EF-hand_5 | 102 | 107 | 8.2e-06 | 24.9 | 2.5 | 5400.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3349.1_32454.t1 | gi|119577832|gb|EAW57428.1| | calmodulin 3 (phosphorylase kinase, delta), isoform CRA_d [Homo sapiens] | 2.0e-13 |
| pfu_aug2.0_3349.1_32454.t1 | gi|755744731|ref|XP_011281779.1| | PREDICTED: calmodulin [Felis catus] | 1.0e-12 |
| pfu_aug2.0_3349.1_32454.t1 | gi|395508086|ref|XP_003758346.1| | 3.0e-12 | |
| pfu_aug2.0_3349.1_32454.t1 | gi|615466160|ref|XP_007599517.1| | calmodulin [Colletotrichum fioriniae PJ7] | 1.0e-11 |
| pfu_aug2.0_3349.1_32454.t1 | gi|676461798|ref|XP_009056059.1| | hypothetical protein LOTGIDRAFT_216192 [Lottia gigantea] | 1.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_3349.1_32454.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3349.1_32454.t1 atgagtaaaggagtgaaacaccatcctaagaaacatcttattccaaaggaggttgacgttctaacagagaaacagaaggg tgaatacaaagaagcctatgagctattccgcaggaacagaaaagggatatacgcaggagaagatctaaaatggacgctga attctatgagctttaatccctcatctgaggagttacaggacttctcagaggcagttgcaaagaatgtcgatgagctaata gacaaagctgacatggatggcgatggagagatagactttgacgaatttgtcaccatgatgaaagatcaggataacgatgg caacgagagcgactaa |
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Protein
| Protein ID | pfu_aug2.0_3349.1_32454.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3349.1_32454.t1 MSKGVKHHPKKHLIPKEVDVLTEKQKGEYKEAYELFRRNRKGIYAGEDLKWTLNSMSFNPSSEELQDFSEAVAKNVDELI DKADMDGDGEIDFDEFVTMMKDQDNDGNESD |
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