Gene
| Gene Model ID | pfu_aug2.0_335.1_17305 |
|---|---|
| Locus | scaffold335.1 : 65497 ... 71945 : - |
| To GenomeBrowser | scaffold335.1:65497..71945 |
| Genes list of scaffold | scaffold335.1 |
| Synonym | pfu_aug1.0_49025.1_63350 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ornithine mitochondrial | GO:0008152 GO:0008483 GO:0030170 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_335.1_17305.t1 | 2 | 1 | Aminotran_3 | 58 | 179 | 0.0 | 350.1 | 9.90001e-40 | 7.4e-36 | 123.6 |
| pfu_aug2.0_335.1_17305.t1 | 2 | 2 | Aminotran_3 | 180 | 346 | 0.0 | 350.1 | 0.0 | 0.0 | 225.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_335.1_17305.t1 | gi|158297845|ref|XP_318019.4| | AGAP004793-PA [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_335.1_17305.t1 | gi|158297847|ref|XP_001689079.1| | AGAP004793-PB [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_335.1_17305.t1 | gi|157109474|ref|XP_001650687.1| | AAEL005289-PA [Aedes aegypti] | 0.0 |
| pfu_aug2.0_335.1_17305.t1 | gi|432923644|ref|XP_004080490.1| | PREDICTED: ornithine aminotransferase, mitochondrial [Oryzias latipes] | 0.0 |
| pfu_aug2.0_335.1_17305.t1 | gi|410895425|ref|XP_003961200.1| | PREDICTED: ornithine aminotransferase, mitochondrial [Takifugu rubripes] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_335.1_17305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_335.1_17305.t1 atgcaacgttttgtgaacaagtcagttgtaaatttcttagctgattctataacagcattcaacctatctgcagtgcgcag tgttgctacatacactgaaaaatcaaaaaacatctttaaacgggaggataaatatggtgcccataattacgctcctattc aagtcgcccttagcaaaggaaaaggtatatatttatgggatgtagaagggaacaagtactatgatttcctgagtgcatac agtgctgtaaatcagggtcattgtcaccctaagatattgaaggccttgacagaccaagctgaggtcctgaccttgacctc aagagctttctacaataacgtgttgggagaatatgagcagtatataacacagatgtttgggtatgacaaagtccttccta tgaacacaggagtggaagggggcgaaacagcatgtaaactggccaggaaatgggcgtacacagtgaagaaggttccagat aataaagccaagatcgtgtttgccgagggtaatttctggggtagaacgctgggagctaaagaatttaaagatccaaattg tgcagcttttatggtggagcctattcagggagaggctggggtgaacgtaccatctgatggatatctcaagaaaatacgag aattatgtgacaaatacaatgtactgtggatagcagatgaagtccagactggactatgtaggactggaaagatgttggct gtagatcatgaaaatgtgaagccagatatacttgttcttggtaaagctctgtcaggaggtgttctgccggttgcagctgt gcttgccaatgatgaggtcatgctgacaataaaaccaggagagcatggctcgacttttggagggaatcccctagcatgta aagtggcaatagcagcattggaggttctggtagaagaaaaactagctgaaaatgcagaaaaattagggaaaattttaagg tctgaactaagtcaattaccaaaggacaaagtcaaactagttagggggaaaggattgttaaatgccatcatcattcaaaa agagtacaatgccatggatgtatgtctaaagctgagggacaacggactccttgctaagcccacacacggagacatcatca gatttgccccgcccctcacaatgaatgaaaaagaactacgacaatgcatcagcattatcaagtcaacaatagaagcattt taa |
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Protein
| Protein ID | pfu_aug2.0_335.1_17305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_335.1_17305.t1 MQRFVNKSVVNFLADSITAFNLSAVRSVATYTEKSKNIFKREDKYGAHNYAPIQVALSKGKGIYLWDVEGNKYYDFLSAY SAVNQGHCHPKILKALTDQAEVLTLTSRAFYNNVLGEYEQYITQMFGYDKVLPMNTGVEGGETACKLARKWAYTVKKVPD NKAKIVFAEGNFWGRTLGAKEFKDPNCAAFMVEPIQGEAGVNVPSDGYLKKIRELCDKYNVLWIADEVQTGLCRTGKMLA VDHENVKPDILVLGKALSGGVLPVAAVLANDEVMLTIKPGEHGSTFGGNPLACKVAIAALEVLVEEKLAENAEKLGKILR SELSQLPKDKVKLVRGKGLLNAIIIQKEYNAMDVCLKLRDNGLLAKPTHGDIIRFAPPLTMNEKELRQCISIIKSTIEAF |
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