Gene
| Gene Model ID | pfu_aug2.0_335.1_17309 |
|---|---|
| Locus | scaffold335.1 : 279078 ... 341035 : - |
| To GenomeBrowser | scaffold335.1:279078..341035 |
| Genes list of scaffold | scaffold335.1 |
| Synonym | pfu_aug1.0_1529.1_22638 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| myoferlin isoform x2 | GO:0016020 GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_335.1_17309.t1 | 7 | 1 | C2 | 3 | 86 | 0.0 | 283.7 | 3.5e-24 | 8.5e-21 | 73.5 |
| pfu_aug2.0_335.1_17309.t1 | 7 | 2 | C2 | 217 | 296 | 0.0 | 283.7 | 3.2e-17 | 8.0e-14 | 51.2 |
| pfu_aug2.0_335.1_17309.t1 | 1 | 1 | FerI | 298 | 369 | 2.3e-26 | 91.6 | 2.6e-29 | 6.5e-26 | 90.1 |
| pfu_aug2.0_335.1_17309.t1 | 7 | 3 | C2 | 378 | 472 | 0.0 | 283.7 | 7.2e-15 | 1.8e-11 | 43.7 |
| pfu_aug2.0_335.1_17309.t1 | 7 | 4 | C2 | 935 | 1025 | 0.0 | 283.7 | 1.1e-16 | 2.7e-13 | 49.5 |
| pfu_aug2.0_335.1_17309.t1 | 7 | 5 | C2 | 1126 | 1161 | 0.0 | 283.7 | 0.00092 | 2.3 | 8.1 |
| pfu_aug2.0_335.1_17309.t1 | 7 | 6 | C2 | 1328 | 1409 | 0.0 | 283.7 | 9.2e-13 | 2.3e-09 | 36.9 |
| pfu_aug2.0_335.1_17309.t1 | 7 | 7 | C2 | 1583 | 1672 | 0.0 | 283.7 | 3.8e-05 | 0.094 | 12.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_335.1_17309.t1 | gi|675720925|ref|XP_008978766.1| | PREDICTED: LOW QUALITY PROTEIN: dysferlin [Callithrix jacchus] | 0.0 |
| pfu_aug2.0_335.1_17309.t1 | gi|602640264|ref|XP_007426947.1| | PREDICTED: dysferlin isoform X2 [Python bivittatus] | 0.0 |
| pfu_aug2.0_335.1_17309.t1 | gi|602640266|ref|XP_007426948.1| | PREDICTED: dysferlin isoform X3 [Python bivittatus] | 0.0 |
| pfu_aug2.0_335.1_17309.t1 | gi|573881977|ref|XP_006629177.1| | PREDICTED: dysferlin-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_335.1_17309.t1 | gi|548522465|ref|XP_005698301.1| | PREDICTED: myoferlin [Capra hircus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_335.1_17309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_335.1_17309.t1 atggcactgcaagtggtggtgataggtgccacaaacgtgcccaatgtggaaaagtttggagaaagtgacccgtatgcctc cgtggaatttcaaggagtgaaaaagaagacagagtacataaaatcagaactgaatcctgtctggaatgagacgtttgaat ttgatctatgtggtaaagcattaacagcttctgatgagctggtgattgaagtcaaagactatgagagagtggggagaaat agattactgggtactgccagagttccgttacgcaatcttttacgcggaggtactcagcaggaacagatgagcattacctt aaacgacagtaatggcagacccctacaagcaaagttgaatatgaaggtgtcgtatcgtccaccggccggtgctcagcagg ctgccagtgctgctggtgcagcaggcgctggtgctcaacaagctcaagaccaagttttaggtgataccctgactgatgct cttgatggagatttgggggaagaggaagaagaagaagagggacctccagaaatcgacccttccacaggacaaccaatcat caaacctaaaaagaaaaagaaggccagaagacttggtcgaagaaaacttcttgagaatctttccaccaaaagcactgatt tccaggtgcgtgtgaaaattatagaggctcgtcagcttcagggaggcaacattcagccagttaccaaggtaacgctaaac aatcagaccaaacagacgagagttaagaagtcgaccaccagcccatactggaatgagtcattcttcttcaatttccacat atcaccagcagaacttatggatgaaattattgaattcaaggtgtttaatgccaagaagctgagatcagatgcattaatag gatccttcaagtgtgatatagggattgtatacctggagcagagacatgcctacatcaacaaatggctgttgctaagcgac ccggaagatcagatggcaggggcaaagggttacctgaaaatcagtgtgtgtgtggtgggccccggagatgaagcacctag tatgaagacagctggggatgaaggagatgatgatattgagagtaatttgctgcgtccttccggagtacaattacgtcctg caaccttccagctcaggttatttagagccgaagacatccctcgcatggattctgccttcatgcaaggaattaagaaagtg tttggtgtcggtgaacctcagaaggaacttgtggacccgtactttgtcttctcctttgccgggaaagaggtacaatcaaa aatcatgtataacaacgaccatccggaatggaaccagatgttaagtatcggactgcagtttccttcaatgtgtgagagaa tcaaattcatgatcaaagactgggacagaattaatgaggacgacaccattggaactagctctctcgccattccacttatc tcgtcctctggcgaaagcggtttcttgccgacatatggaccatgctttgtcaatttttatggatccaccagagaatattc tgatctgcctgatgaatatgatgatctgaatcatggaaagggagaaggggtagcctacaggggtcgtgccctggtagaac ttgccacgacgctcggggaatatccatcaatcactaccgaggaaattaacaacgacgatatactcagagtccagaaattt atgaggaggaggaagtacaaactacatgcagcatttatgaatgccacaatggtcagtgctatagatgctcctgtagaatt tgaagtcagcattggtaactatggcaacaaattggatgagaacacgcccccatgcccctcgacgacccaacccaccaatg ccgtatttgacggctgccattactacttcctgccgtggggtggcacaaaaccatgcgttgtcgttgagtcctcatgggaa gatatcagcttcagactggaggccctcaacagtctgctcaagaccattgatacattggaaaccaacatagagcaagtaaa gataggtctacaggcaaagttacccacaccagaactagctcagcttctgatatcactgatagatcaacttgtacaggact agtacccagggtgtaagaatgagaaggacaagataagcactgtacctggattactccggatgaagctatggcttggatta agtacggaggatgatgcgtggcatcatatgcaatcagagggagaaatggctgtctttgctgaaacgtatgagaatgagtg taacattcctgtggttggatggaccaagaagggaccactaggtagacctaaatggtcagacagtcagggaaagtgtaaac taccaaaggaatcatttgagcctccgcctggttggagatgggagggagattggtacattagtcctgaactcagcatgtta tttgacaaggacgctggtcacactgtgtatatggaggatgtgtacgagtgtcagtctcgtttaccggcagcgacgtggat gcctgcttctgtcgcatggaccgatgtgaaaggagataccttaccgtccaaggaggagaccgatttgccgccaggttggg tgtgggaggatgaatggcagatagacttgtccagagctgttgatgaagaaggatgggagtactgtgttgaagccacgatg ggtggctacggtccagtggagaaaaggtaccatatattatatgttgcttttacccagaaaaaagggaaggaaaagaagga cgaggatgacaaggaggattttaattcggcttacgcagctccgaggatgttcctcacctttgacaaggcctataagtacc agttgagagcttatatctaccaagctagagatctactggctggagatgaaacaggtttatcagacccatatgcccgcctg tccttcctaacacagagcgcctccacagagaaaatccacaaatcactatgccccacctgggaccaaacgctgatatttga agaaatggaaatctatggagacccgagagtactagaagaaaccccaccagaaatctttgtagagatttttgattttgaca aatttggatccaatgaatttcttggaagagccaaggctcagccaatggtgaagctcgatccatctgatgctaggatgcca gtcctacaatggtatccaatcaagagaggcaatgaagatggtggagagctattagctgcatttgaattattcttggttcc agataagaatgagtctatggaaagtctgctgagcggtgctgacctacctttcttacctccaaagagaggtgacttatatc ttgtccctaacggtattcgtcctgtgatgcagagaactgctatagaggtgttatgttggggagtcaggaacatgaagaag tttcagcttgcagcgtgcacatcaccgagtattgagtttgaatgtggaggtcaaatcttggagtccaaggtcatcaagaa tacgaagaaaaatccgaattttgatgagcctgtcctcttctttgatattggattggtcaatactgcagtagatagatata aaactatccaatcaactgtcagtaatcttgaccaatctcttgccagctacaacacgggaggtttggtgaatggtcctagt ggagaccacatcgtagagatgccgggagacgagacaaaggaggttgatcaatctttagatgatgagatagattggtggtc taagtactacgcctcaactggacaaaatcataaatgtcgcaaatatgtagagctaggactggacagaatacaggttcatc catcagaattagagaaggcgggatcaaacaaggactttgatgatttctgtagtacattcagactgaacagaggaaaagac gaggaagatgaggaatctgacattgtaggagaattcaagggaggatttaaggtgtatcccttacccccagaccccagtga gcccctccctaatcgtatgtttgccaacttacctcccagcaaaccggaggagtgtatagtcagagtctacgtagtctgtg gtatagacttccagcccaacgattcaagtggacttgctgacccttacattgagattgtgcttggcaagaagaaaatcaac gatcgtgacgactatgtacctaacaccatagaccctgtgttcggtaggatgtatgagttgacgtgtacattaccagtaga aaaagacttaactgttagagtgaaggactatgacatcataagtgcagatgatgtcattggagaaacaaaaatagatctgg agaacaggatgttgtcaaaggcccgagctacgtgtggtctgcagaaaacatactgcatagctggtgtgaaccaatggcga gactgtgagaaacccaagcagattctggagggatggtgcaaggtggcacatctctctggtcctctgtactacggcaataa tagtgttaaagtgggaaagaagatatacaacctggctgactttgaaccaaacaaacctagtgatcctaaccttggaccag cggaggagagacttgccctacatgtgttacacacgttcccgttagtaaaggaacatgtggagaccagacccctgtacaac cctatacaacctggtattgaacagggtaaactgcagatgtgggtggatattttccctaagtcgttaggacctccaggtcc tccattcaaggtagagccccgcagagccaaagaatatgtgttgcgttgtataatctggaacactgttgatgtcatattgg atgaagagtccatcactggagaacaaatgagtgacatctatgtaaaaggctggatatcaggaattgacgagaagcagaaa acggatgttcactacagatcattagatggagagggtaattttaattggaggatggtgttccccttcaattacatggcagc ggaacagaccatggttgtcaagaaaaaggagcatttctggagtttggacgagacagagcaacatttacagccgatcatga tggtccaagtctgggacaatgataaattctccatggatgatttcctaggaaatgtttttaagggtaaagtagagatggaa cttgagttggtgagtacagaggaagcggaggagagacctgcaggtgtcggacaggaagaaccaaatatgaacccacacct ggatccacctaaacgaccagagacatcattcctgtggtttacctccccttggaagactttccgttacattatttggcgta actacaagtggtacttcataatcggactgctgctgttactcctcatattactcatcttcctcttcatctattccttccct aagtgccttttgagaaatctttggaattcagaaagtgtatag |
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Protein
| Protein ID | pfu_aug2.0_335.1_17309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_335.1_17309.t1 MALQVVVIGATNVPNVEKFGESDPYASVEFQGVKKKTEYIKSELNPVWNETFEFDLCGKALTASDELVIEVKDYERVGRN RLLGTARVPLRNLLRGGTQQEQMSITLNDSNGRPLQAKLNMKVSYRPPAGAQQAASAAGAAGAGAQQAQDQVLGDTLTDA LDGDLGEEEEEEEGPPEIDPSTGQPIIKPKKKKKARRLGRRKLLENLSTKSTDFQVRVKIIEARQLQGGNIQPVTKVTLN NQTKQTRVKKSTTSPYWNESFFFNFHISPAELMDEIIEFKVFNAKKLRSDALIGSFKCDIGIVYLEQRHAYINKWLLLSD PEDQMAGAKGYLKISVCVVGPGDEAPSMKTAGDEGDDDIESNLLRPSGVQLRPATFQLRLFRAEDIPRMDSAFMQGIKKV FGVGEPQKELVDPYFVFSFAGKEVQSKIMYNNDHPEWNQMLSIGLQFPSMCERIKFMIKDWDRINEDDTIGTSSLAIPLI SSSGESGFLPTYGPCFVNFYGSTREYSDLPDEYDDLNHGKGEGVAYRGRALVELATTLGEYPSITTEEINNDDILRVQKF MRRRKYKLHAAFMNATMVSAIDAPVEFEVSIGNYGNKLDENTPPCPSTTQPTNAVFDGCHYYFLPWGGTKPCVVVESSWE DISFRLEALNSLLKTIDTLETNIEQVKIGLQAKLPTPELAQLLISLIDQLVQDXYPGCKNEKDKISTVPGLLRMKLWLGL STEDDAWHHMQSEGEMAVFAETYENECNIPVVGWTKKGPLGRPKWSDSQGKCKLPKESFEPPPGWRWEGDWYISPELSML FDKDAGHTVYMEDVYECQSRLPAATWMPASVAWTDVKGDTLPSKEETDLPPGWVWEDEWQIDLSRAVDEEGWEYCVEATM GGYGPVEKRYHILYVAFTQKKGKEKKDEDDKEDFNSAYAAPRMFLTFDKAYKYQLRAYIYQARDLLAGDETGLSDPYARL SFLTQSASTEKIHKSLCPTWDQTLIFEEMEIYGDPRVLEETPPEIFVEIFDFDKFGSNEFLGRAKAQPMVKLDPSDARMP VLQWYPIKRGNEDGGELLAAFELFLVPDKNESMESLLSGADLPFLPPKRGDLYLVPNGIRPVMQRTAIEVLCWGVRNMKK FQLAACTSPSIEFECGGQILESKVIKNTKKNPNFDEPVLFFDIGLVNTAVDRYKTIQSTVSNLDQSLASYNTGGLVNGPS GDHIVEMPGDETKEVDQSLDDEIDWWSKYYASTGQNHKCRKYVELGLDRIQVHPSELEKAGSNKDFDDFCSTFRLNRGKD EEDEESDIVGEFKGGFKVYPLPPDPSEPLPNRMFANLPPSKPEECIVRVYVVCGIDFQPNDSSGLADPYIEIVLGKKKIN DRDDYVPNTIDPVFGRMYELTCTLPVEKDLTVRVKDYDIISADDVIGETKIDLENRMLSKARATCGLQKTYCIAGVNQWR DCEKPKQILEGWCKVAHLSGPLYYGNNSVKVGKKIYNLADFEPNKPSDPNLGPAEERLALHVLHTFPLVKEHVETRPLYN PIQPGIEQGKLQMWVDIFPKSLGPPGPPFKVEPRRAKEYVLRCIIWNTVDVILDEESITGEQMSDIYVKGWISGIDEKQK TDVHYRSLDGEGNFNWRMVFPFNYMAAEQTMVVKKKEHFWSLDETEQHLQPIMMVQVWDNDKFSMDDFLGNVFKGKVEME LELVSTEEAEERPAGVGQEEPNMNPHLDPPKRPETSFLWFTSPWKTFRYIIWRNYKWYFIIGLLLLLLILLIFLFIYSFP KCLLRNLWNSESV |
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