Gene
| Gene Model ID | pfu_aug2.0_3381.1_05821 |
|---|---|
| Locus | scaffold3381.1 : 14305 ... 48315 : - |
| To GenomeBrowser | scaffold3381.1:14305..48315 |
| Genes list of scaffold | scaffold3381.1 |
| Synonym | pfu_aug1.0_28548.1_04643 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3381.1_05821.t1 | 1 | 1 | G8 | 171 | 289 | 1.9e-27 | 95.5 | 2.3e-31 | 3.5e-27 | 94.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3381.1_05821.t1 | gi|395514983|ref|XP_003761688.1| | PREDICTED: transmembrane protein 2 [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_3381.1_05821.t1 | gi|632976402|ref|XP_007904775.1| | PREDICTED: transmembrane protein 2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_3381.1_05821.t1 | gi|558227790|ref|XP_006137890.1| | PREDICTED: transmembrane protein 2 isoform X1 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3381.1_05821.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3381.1_05821.t1 atgaagctccacgtttttgtctttctcatcttacttttcatcgctctcagcgaggcttggttcacctcatcatcgtcaag atcatcgtccaggtcatcttcagggtcatcttctgggtcatcgtgggtacggaatacctacaacaaagtcaggaactggg ccaaagacnaaactttttttcagtagtactggtacaaacttggaacaggtaaattcaagaggatggcgtttgggctgacc gcggcccttgtgttttatttctctctaggagtggtgacttcatcctgtccggagactgacccttcactacagagatggtc agctgcagcatcatggactaatacccagctgtatagtaaccctgggggagattttgctatctgggctgatttcccgccaa ttcgtgtgaggtcattacaatctttccataacaaagactatcttcgtagaagcttaagtttgaaatgtgaagagaactcc ggtgacttagaaaactggtctaatccattctcttgggataagggaaagacacctggtgccaatcagaatgttacaatcac aaggcccattctactggataccacacctcccgaacttttcagtataacgatagaatcaggcgggcggttagtgtggggta ccgatggagactacagtctacgtctccactacatcctcgtcaagtcagggggagaaatgcacattggatctgaggactgt aaattctctgccaaggcttccattactttacttggtgagcctggggaattggaaatcactggttttggagaaaaattcat cggagtgcaatcaggcggaacattggaactgcatggacaagataagctgtcctggacaaaagttaccaaaactgttccga aatttgatttgtcactggggcaaaagtttggacacaaggaacttgagggtacacagcactgggatggagtgtttgcttac cagttcacaccagatggcacctacgtgaaccgactgttccggtccatttcacacaaccggcagaaatctgtggactggaa catcggcaaactgaagaaattcatggatggtgttgccgatggtaacatattggcctttgctacacagagagaccacaata ggaaaggaagtgaccacagcgccctctatgacctgatagatagcgtagccgggcctaataagttacgacagatcggctct aagtctgcctatgcactcgttactgtgaaaggtcagccatccagtactgtggattcattaagccacgtggatcttaactc aaattccgattccgcatacgctagagtggagagggcaatgacagtgaacggggaggatctacagttggtcgtggagtcgt actataacgccagacgacgatggatggggtatagcaacttcagggtgatggacacaaagtactcaaatccaatcatcgat ttagtagacgaaccaaggggctggaaagcaggtgacaggatttttgtaacatccactgactatgactggcagcaagtaga agagcgcaccttaatgtcatgtccttcgtgtactgctacacagatcaaagtcgacaagccatttgagtacgaacattttg gagaaattgtcaagaatgtggacatgagggctgaagtaggacttatgacacgtaatatcctgatacgaggggaggtatca aaagatcaaaccaatgggggacatgtcaagtttttgaaaggattcaagagtgtcagagtggaaggggtggagctaacaaa gatgggacagccaatgaaactaggtcgttaccccttacattaccatatgtgtgataacttgactgattcaacaatgtacc ctacaccgtcaactgcaaccacattctggttgacaaatccaaagacaactctaattggaaatgtagcagctggtggagat ggtgccggcatgtggtttgtttacccagatatacctactggcccatcaagtacaatgaaccttatggcagagagggaagc ccgccgtaccaaaatcacaaagtttgaaaacaatgtgtgccactcatacaataaggcgggactatttgtggacaatatag agcaggacgatctgacagtgaagggctataaccagtataatccccgtgaaaacccgctggatcgtaaatcaccgtctgtt cccgtcctttttaacagactcactgccacaatcatgaatggcagccatggcagtgacagacttgtgaacaggagcattgt cctgatggaacaacacaccttaattagtgagctttcctcggctcttaagtttaatattttcccttactgtgtcagaagtg aagcataagtcttgtttttcaagcttgtaggagacaaagattacacttcaggagaaaataacgaatgtccgaacaaaaaa tgcccgatgttcaaactacgcatcaacaatggtgatctcacagataatgactgcagaacgagatttaagaatgtgctaca gtatgttgagccagcaacgggcgtggccttgcaggactcgtcagtgctgccctctgatggggaaaatccaccaagtggct ggggagctggctccacatatccttaa |
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Protein
| Protein ID | pfu_aug2.0_3381.1_05821.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3381.1_05821.t1 MKLHVFVFLILLFIALSEAWFTSSSSRSSSRSSSGSSSGSSWVRNTYNKVRNWAKDXTFFQXYWYKLGTGKFKRMAFGLT AALVFYFSLGVVTSSCPETDPSLQRWSAAASWTNTQLYSNPGGDFAIWADFPPIRVRSLQSFHNKDYLRRSLSLKCEENS GDLENWSNPFSWDKGKTPGANQNVTITRPILLDTTPPELFSITIESGGRLVWGTDGDYSLRLHYILVKSGGEMHIGSEDC KFSAKASITLLGEPGELEITGFGEKFIGVQSGGTLELHGQDKLSWTKVTKTVPKFDLSLGQKFGHKELEGTQHWDGVFAY QFTPDGTYVNRLFRSISHNRQKSVDWNIGKLKKFMDGVADGNILAFATQRDHNRKGSDHSALYDLIDSVAGPNKLRQIGS KSAYALVTVKGQPSSTVDSLSHVDLNSNSDSAYARVERAMTVNGEDLQLVVESYYNARRRWMGYSNFRVMDTKYSNPIID LVDEPRGWKAGDRIFVTSTDYDWQQVEERTLMSCPSCTATQIKVDKPFEYEHFGEIVKNVDMRAEVGLMTRNILIRGEVS KDQTNGGHVKFLKGFKSVRVEGVELTKMGQPMKLGRYPLHYHMCDNLTDSTMYPTPSTATTFWLTNPKTTLIGNVAAGGD GAGMWFVYPDIPTGPSSTMNLMAEREARRTKITKFENNVCHSYNKAGLFVDNIEQDDLTVKGYNQYNPRENPLDRKSPSV PVLFNRLTATIMNGSHGSDRLVNRSIVLMEQHTLISELSSALKFNIFPYCVRSEAXVLFFKLVGDKDYTSGENNECPNKK CPMFKLRINNGDLTDNDCRTRFKNVLQYVEPATGVALQDSSVLPSDGENPPSGWGAGSTYP |
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