Gene
| Gene Model ID | pfu_aug2.0_3381.1_05822 |
|---|---|
| Locus | scaffold3381.1 : 51505 ... 64139 : - |
| To GenomeBrowser | scaffold3381.1:51505..64139 |
| Genes list of scaffold | scaffold3381.1 |
| Synonym | pfu_aug1.0_8850.1_38830 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3381.1_05822.t1 | 1 | 1 | Peptidase_C2 | 3 | 109 | 1.7e-34 | 119.2 | 4.9e-38 | 2.4e-34 | 118.6 |
| pfu_aug2.0_3381.1_05822.t1 | 1 | 1 | Calpain_III | 126 | 251 | 2.9e-34 | 117.8 | 1.1e-37 | 5.3e-34 | 116.9 |
| pfu_aug2.0_3381.1_05822.t1 | 2 | 1 | C2 | 150 | 169 | 7.8e-20 | 70.5 | 1.4 | 6700.0 | -3.0 |
| pfu_aug2.0_3381.1_05822.t1 | 2 | 2 | C2 | 283 | 359 | 7.8e-20 | 70.5 | 4.1e-23 | 2.0e-19 | 69.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3381.1_05822.t1 | gi|698399035|ref|XP_009808303.1| | PREDICTED: calpain-5, partial [Gavia stellata] | 0.0 |
| pfu_aug2.0_3381.1_05822.t1 | gi|701300108|ref|XP_010010482.1| | PREDICTED: calpain-5 [Nestor notabilis] | 0.0 |
| pfu_aug2.0_3381.1_05822.t1 | gi|701318360|ref|XP_009986936.1| | PREDICTED: calpain-5 [Tauraco erythrolophus] | 0.0 |
| pfu_aug2.0_3381.1_05822.t1 | gi|723570391|ref|XP_010305237.1| | PREDICTED: calpain-5, partial [Balearica regulorum gibbericeps] | 0.0 |
| pfu_aug2.0_3381.1_05822.t1 | gi|719796535|ref|XP_010224809.1| | PREDICTED: calpain-5, partial [Tinamus guttatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3381.1_05822.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3381.1_05822.t1 gcaacatcacaacatgacatggaggctaaaatgtcctgtggtctggttaaaggtcacgcttacagtgtcacggctgtcaa aaatatccgtctcggaaaaggactcatgtcatacttcaacagggaaaaaatccacatgatgagatgtcgaaatccgtggg gcggtactgagtggaagggtgcatggagtgatgggtcagttgaatggcagcaggttagctccagtgagaaaaaagatatg ggactgacatttgatgaagatggagatttttggatgacctatgaggattttctctgttatttcaccagtatggatatttg tcacatgctaaacacctccttcatctcacttagcaagtcctaccgagagggtaaggccctcggggagtggaagagaggaa agtgtggtggatgtagtaattacccatcattcttacaaaatccacagtataagtttgacgtagatgatgctgaggatgaa gtgatgatatcactagagcaatgggacggcagaattaacagggacaagggaagggacaatgaaaccatcggcttctgtgt tatgaagacggatagaaacagaaagtaccggatgcacgacaccttggagaaagtccaaaccacatcgtacagtaactctc gtaatcaattcgtacgtctcacactgacagagggacgatactgtatcataccaacgacctttgaacctaatgtccaatgt aaatttcttctccgagtttacggcaattctgaccctagtctcaaagagttatacctagatgaacccccgccaccagattc cggtatttttggtattggagcgaagaaacccaaagtagcggccactcaaatcaccgtcatcagagccgagggactggaag tacaggacagggacggcttctctgatccctatgtggtgatattttgtgaaaaaaagaaagagagaacgcggattatcaaa aacaacattaacccagaatggaatgagagaatgacgttttatcatcgcaaaccccatgaagacattgatgtagagatatg gaattacaacaagattcgtgacgagcttcttggtgcttttgtgatccccatgtcagacaggacccgatacagcagtgctc accatatccagaaatttgatctgttcggaaaaggaaaggaatcaagtatgaataaacccggctgtctctggcttaaaata ctccatacaaaagatatggacaaaatctga |
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Protein
| Protein ID | pfu_aug2.0_3381.1_05822.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3381.1_05822.t1 ATSQHDMEAKMSCGLVKGHAYSVTAVKNIRLGKGLMSYFNREKIHMMRCRNPWGGTEWKGAWSDGSVEWQQVSSSEKKDM GLTFDEDGDFWMTYEDFLCYFTSMDICHMLNTSFISLSKSYREGKALGEWKRGKCGGCSNYPSFLQNPQYKFDVDDAEDE VMISLEQWDGRINRDKGRDNETIGFCVMKTDRNRKYRMHDTLEKVQTTSYSNSRNQFVRLTLTEGRYCIIPTTFEPNVQC KFLLRVYGNSDPSLKELYLDEPPPPDSGIFGIGAKKPKVAATQITVIRAEGLEVQDRDGFSDPYVVIFCEKKKERTRIIK NNINPEWNERMTFYHRKPHEDIDVEIWNYNKIRDELLGAFVIPMSDRTRYSSAHHIQKFDLFGKGKESSMNKPGCLWLKI LHTKDMDKI |
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