Gene
| Gene Model ID | pfu_aug2.0_340.1_00622 |
|---|---|
| Locus | scaffold340.1 : 24137 ... 54675 : - |
| To GenomeBrowser | scaffold340.1:24137..54675 |
| Genes list of scaffold | scaffold340.1 |
| Synonym | pfu_aug1.0_301.1_14960 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_340.1_00622.t2 | 2 | 1 | RUN | 85 | 208 | 3.2e-27 | 94.9 | 8.6e-30 | 2.1e-26 | 92.2 |
| pfu_aug2.0_340.1_00622.t2 | 2 | 2 | RUN | 444 | 494 | 3.2e-27 | 94.9 | 1.2 | 2900.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_340.1_00622.t2 | gi|752876878|ref|XP_011255857.1| | PREDICTED: protein RUFY3 isoform X1 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_340.1_00622.t2 | gi|642914500|ref|XP_008201701.1| | PREDICTED: RUN and FYVE domain-containing protein 2 isoform X1 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_340.1_00622.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00622.t1 atggccgatgcagaaacaaaacaatcatatgacagtgaccaaaaatcagaaaatggaataatgaacaaatcatcaccaag caggaatgtaaagcaggacgatttatggcccaaacctgtcgttgcaactccagagaaagccagggcaaaaaccacattcc gagaggaacgttacaaaagaagagatccacgtacaatagagcgatgtaacctactgaacgtatctaaacttatcatcaag gagctgatagattccagtctgtcacacggacggatgctggacgacgaacatgtgccactccaacaattctttgttgtgct agagcatgttctgttacatggtcttaaacctaagaagggtctgttacgagatcggcgtgacttctgggtggtgttagaaa cagtggaaaagatggtcccagaagcctccgaaattactactagtgtcagagaaatgcctaatatcaaatcaccactcggc agagctagagcatggttgaggttggctatgatgcagaaaacacttccagattattttaaaatacttatagaacgcaaaga tcagatactcaatgaattttacgaacctggtgctatattgatagaggatgaaggggctgtgatagcgggacttctggtcg gcctgaacgtgatagactgtaacatgtgtatcaaagaacaagatctagatcaacctatgggagttatagattttagcctt tatctgaaggatggaaggataggtgatgatgactccccagatcaagacagtgcagaaaccagaaacaaaatggcaaccat tttggaccagaaaaattacttagaggaacttaacagacatttaaatgccacagtaacaaacctacaacagaagcttgaga cttcccagactaccaatgccttaatgaaggaggaccttgccatagctcagaacacaatactaaacttacaggaggaaaac aacagactgaatgctagtcagactatagtcgtggaggatgtgcagagacaattagaagcagccaagcatgacatagagac agagcgtgagacttatcatacatcaagggccgggctagataacatgtactctgacctcaaaaagaaactggaggaggaaa ctcacataagactggatgtggagaaagagttagagttacaaataagcatgaagcaagagacagaaatggcgttacgtatt ctggaaaaagatattcatgagaaacaggatacaatgatctcactacgcaaacaactagaagaaatcaaagctatcaacct ggaaatgtaccaaaaattacagagctgtgagagtggtctgaaacacaaaacagagctggtctcaaaactggaagagaaaa ctaaccagcttgtttcatcactaaaggaaatggagaaaagactgaaacaagcagaaggggataaacaagccgctgaagaa acagccagaaaactgggtcagatcatagccgacaaagacaacaaacggactgccttagaaacagacttaaaaatagagcg ggaatggagaggtactttacagaaatcattagaacaggaaaaagaaaaagttgaaaccgtacaaaatgagattcatcact ataaagaagtagaaaaagaataccatatgttaaaggatagacacatacagttacagaatacatgtgaagaacaagagaaa actctctcagaattaggatcacatctcagcgaatccaaactacgagtagaggatatgagagaggcacagcaagttataaa ggaagcacagtggaagagcgatcaagacgcatctcattgctctagttgttctaaagaattctcaatatcaagaagaaagc atcactgtcggaactgtggagaaatattctgtaatgagtgttcggacaataaaatgccgttaccctcatcagccaagccg gtgcgagtctgtgataattgtcagacattactgcttcagaggtactcctcggcggggaactga |
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| Transcript ID | pfu_aug2.0_340.1_00622.t2 |
| Definition | - |
>pfu_aug2.0_340.1_00622.t2 atggcagaggagaccatctatctgtgtaactttcgggtgtcggttgacggggattggttatgtttgaaggaacttagtga tgtgcagttggagctagatacagtagaatctcctcagtccgaggacggaagagatccacgtacaatagagcgatgtaacc tactgaacgtatctaaacttatcatcaaggagctgatagattccagtctgtcacacggacggatgctggacgacgaacat gtgccactccaacaattctttgttgtgctagagcatgttctgttacatggtcttaaacctaagaagggtctgttacgaga tcggcgtgacttctgggtggtgttagaaacagtggaaaagatggtcccagaagcctccgaaattactactagtgtcagag aaatgcctaatatcaaatcaccactcggcagagctagagcatggttgaggttggctatgatgcagaaaacacttccagat tattttaaaatacttatagaacgcaaagatcagatactcaatgaattttacgaacctggtgctatattgatagaggatga aggggctgtgatagcgggacttctggtcggcctgaacgtgatagactgtaacatgtgtatcaaagaacaagatctagatc aacctgttagagatagatctcgaactcttgtaacttacggtatgggagttatagattttagcctttatctgaaggatgga aggataggtgatgatgactccccagatcaagacagtgcagaaaccagaaacaaaatggcaaccattttggaccagaaaaa ttacttagaggaacttaacagacatttaaatgccacagtaacaaacctacaacagaagcttgagacttcccagactacca atgccttaatgaaggaggaccttgccatagctcagaacacaatactaaacttacaggaggaaaacaacagactgaatgct agtcagactatagtcgtggaggatgtgcagagacaattagaagcagccaagcatgacatagagacagagcgtgagactta tcatacatcaagggccgggctagataacatgtactctgacctcaaaaagaaactggaggaggaaactcacataagactgg atgtggagaaagagttagagttacaaataagcatgaagcaagagacagaaatggcgttacgtattctggaaaaagatatt catgagaaacaggatacaatgatctcactacgcaaacaactagaagaaatcaaagctatcaacctggaaatgtaccaaaa attacagagctgtgagagtggtctgaaacacaaaacagagctggtctcaaaactggaagagaaaactaaccagcttgttt catcactaaaggaaatggagaaaagactgaaacaagcagaaggggataaacaagccgctgaagaaacagccagaaaactg ggtcagatcatagccgacaaagacaacaaacggactgccttagaaacagacttaaaaatagagcgggaatggagaggtac tttacagaaatcattagaacaggaaaaagaaaaagttgaaaccgtacaaaatgagattcatcactataaagaagtagaaa aagaataccatatgttaaaggatagacacatacagttacagaatacatgtgaagaacaagagaaaactctctcagaatta ggatcacatctcagcgaatccaaactacgagtagaggatatgagagaggcacagcaagttataaaggaagcacagtggaa gagcgatcaagacgcatctcattgctctagttgttctaaagaattctcaatatcaagaagaaagaaatttgaacttgtta ggacatactggtattatgcaaaaccactgaactttaatgcaagctgttaa |
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Protein
| Protein ID | pfu_aug2.0_340.1_00622.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00622.t1 MADAETKQSYDSDQKSENGIMNKSSPSRNVKQDDLWPKPVVATPEKARAKTTFREERYKRRDPRTIERCNLLNVSKLIIK ELIDSSLSHGRMLDDEHVPLQQFFVVLEHVLLHGLKPKKGLLRDRRDFWVVLETVEKMVPEASEITTSVREMPNIKSPLG RARAWLRLAMMQKTLPDYFKILIERKDQILNEFYEPGAILIEDEGAVIAGLLVGLNVIDCNMCIKEQDLDQPMGVIDFSL YLKDGRIGDDDSPDQDSAETRNKMATILDQKNYLEELNRHLNATVTNLQQKLETSQTTNALMKEDLAIAQNTILNLQEEN NRLNASQTIVVEDVQRQLEAAKHDIETERETYHTSRAGLDNMYSDLKKKLEEETHIRLDVEKELELQISMKQETEMALRI LEKDIHEKQDTMISLRKQLEEIKAINLEMYQKLQSCESGLKHKTELVSKLEEKTNQLVSSLKEMEKRLKQAEGDKQAAEE TARKLGQIIADKDNKRTALETDLKIEREWRGTLQKSLEQEKEKVETVQNEIHHYKEVEKEYHMLKDRHIQLQNTCEEQEK TLSELGSHLSESKLRVEDMREAQQVIKEAQWKSDQDASHCSSCSKEFSISRRKHHCRNCGEIFCNECSDNKMPLPSSAKP VRVCDNCQTLLLQRYSSAGN |
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| Protein ID | pfu_aug2.0_340.1_00622.t2 |
| Definition | - |
>pfu_aug2.0_340.1_00622.t2 MAEETIYLCNFRVSVDGDWLCLKELSDVQLELDTVESPQSEDGRDPRTIERCNLLNVSKLIIKELIDSSLSHGRMLDDEH VPLQQFFVVLEHVLLHGLKPKKGLLRDRRDFWVVLETVEKMVPEASEITTSVREMPNIKSPLGRARAWLRLAMMQKTLPD YFKILIERKDQILNEFYEPGAILIEDEGAVIAGLLVGLNVIDCNMCIKEQDLDQPVRDRSRTLVTYGMGVIDFSLYLKDG RIGDDDSPDQDSAETRNKMATILDQKNYLEELNRHLNATVTNLQQKLETSQTTNALMKEDLAIAQNTILNLQEENNRLNA SQTIVVEDVQRQLEAAKHDIETERETYHTSRAGLDNMYSDLKKKLEEETHIRLDVEKELELQISMKQETEMALRILEKDI HEKQDTMISLRKQLEEIKAINLEMYQKLQSCESGLKHKTELVSKLEEKTNQLVSSLKEMEKRLKQAEGDKQAAEETARKL GQIIADKDNKRTALETDLKIEREWRGTLQKSLEQEKEKVETVQNEIHHYKEVEKEYHMLKDRHIQLQNTCEEQEKTLSEL GSHLSESKLRVEDMREAQQVIKEAQWKSDQDASHCSSCSKEFSISRRKKFELVRTYWYYAKPLNFNASC |
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