Gene
| Gene Model ID | pfu_aug2.0_340.1_00623 |
|---|---|
| Locus | scaffold340.1 : 55786 ... 63905 : + |
| To GenomeBrowser | scaffold340.1:55786..63905 |
| Genes list of scaffold | scaffold340.1 |
| Synonym | pfu_aug1.0_301.1_14959 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| bifunctional methylenetetrahydrofolate dehydrogenase mitochondrial | GO:0004488 GO:0009396 GO:0043167 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_340.1_00623.t1 | 1 | 1 | THF_DHG_CYH | 10 | 127 | 3.09967e-42 | 143.3 | 1.4013e-45 | 4.40008e-42 | 142.8 |
| pfu_aug2.0_340.1_00623.t1 | 1 | 1 | THF_DHG_CYH_C | 131 | 303 | 0.0 | 212.2 | 0.0 | 0.0 | 211.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_340.1_00623.t1 | gi|676480230|ref|XP_009061994.1| | hypothetical protein LOTGIDRAFT_107221, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_340.1_00623.t1 | gi|260837449|ref|XP_002613716.1| | hypothetical protein BRAFLDRAFT_62006 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_340.1_00623.t1 | gi|586523651|ref|XP_006905253.1| | PREDICTED: bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial [Pteropus alecto] | 0.0 |
| pfu_aug2.0_340.1_00623.t1 | gi|640811857|ref|XP_008062567.1| | PREDICTED: bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial [Tarsius syrichta] | 0.0 |
| pfu_aug2.0_340.1_00623.t1 | gi|632987378|ref|XP_007910754.1| | PREDICTED: bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_340.1_00623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00623.t1 atgcctcatgggaggctagcagctgcaaagattattgatggtgtggctctagctaaggagataaaggatgaagtgaagct agagatagatcagttggtagccgcaggcggcagacatcccatgttaacggtggtactggtaggagaggacccagctagcc agacgtacatcaaaaacaaaatgaaggcttgtacatatacaggaatcgagagtaggagtatattcttaccagctgagaca acagaatcagaacttctcaagacgatagacgatctaaataacgatgattctgtagatggaatcctagtgcagcttcctgt gccagaccatataacggagaggaaagtttgtaatgctgtagctcctcataaagacgtagatggatttaatgttataaacg taggacgattctgttcagatcagatgacttttataccggctacaccagcaggagtaatggagatgatcagacgtacaggt attgagacatttggtaagaatgctgttgtatgcgggaggtcaaagaatgtgggtatgcccttggccatgctgcttcacgc tgatgggaagtatgaaactaatgcaggtgatgctaccacgacaatatgtcacaggtatacaccccctgaacagctgcccg tgtttactaagacggcagacatcgttgttgtcgctacaggcattccaaagctgataactgctgatatcattaaagagggg gcgactatcattgatgtaggaattaaccgaatcaaagatgagaaaacagggaaaactaaacttgttggtgatgtggattt tgaagaggtttcgaagaaagcaggttacatcacacctgtacctgggggagttggtcctatgacagttgcgatgctgacca agaacacactgatggcttataaaaaggagattaattttgattga |
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Protein
| Protein ID | pfu_aug2.0_340.1_00623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00623.t1 MPHGRLAAAKIIDGVALAKEIKDEVKLEIDQLVAAGGRHPMLTVVLVGEDPASQTYIKNKMKACTYTGIESRSIFLPAET TESELLKTIDDLNNDDSVDGILVQLPVPDHITERKVCNAVAPHKDVDGFNVINVGRFCSDQMTFIPATPAGVMEMIRRTG IETFGKNAVVCGRSKNVGMPLAMLLHADGKYETNAGDATTTICHRYTPPEQLPVFTKTADIVVVATGIPKLITADIIKEG ATIIDVGINRIKDEKTGKTKLVGDVDFEEVSKKAGYITPVPGGVGPMTVAMLTKNTLMAYKKEINFD |
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