Gene
| Gene Model ID | pfu_aug2.0_340.1_00627 |
|---|---|
| Locus | scaffold340.1 : 132974 ... 141235 : - |
| To GenomeBrowser | scaffold340.1:132974..141235 |
| Genes list of scaffold | scaffold340.1 |
| Synonym | pfu_aug1.0_301.1_14954 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_340.1_00627.t1 | 2 | 1 | Stk19 | 65 | 92 | 2.2e-33 | 115.7 | 1.7e-05 | 0.25 | 10.7 |
| pfu_aug2.0_340.1_00627.t1 | 2 | 2 | Stk19 | 104 | 231 | 2.2e-33 | 115.7 | 7.0e-34 | 1.0e-29 | 103.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_340.1_00627.t1 | gi|676488339|ref|XP_009064584.1| | hypothetical protein LOTGIDRAFT_196439 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_340.1_00627.t1 | gi|573899071|ref|XP_006637267.1| | PREDICTED: serine/threonine-protein kinase 19-like isoform X1 [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_340.1_00627.t1 | gi|573899073|ref|XP_006637268.1| | PREDICTED: serine/threonine-protein kinase 19-like isoform X2 [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_340.1_00627.t1 | gi|542249656|ref|XP_005461116.1| | PREDICTED: serine/threonine-protein kinase 19-like isoform X1 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_340.1_00627.t1 | gi|632952382|ref|XP_007891820.1| | PREDICTED: serine/threonine-protein kinase 19 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_340.1_00627.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00627.t1 atgagcaggaagagagcattggttaatgatttatacaaatcaaaaaagcgtatatgtgctgctctcaactcagatgctaa gaactcagacctcatcacagaggaagctggatcttcatataaagctgatgatataccatgtgacaccaaagtagccctgc ttcaccttcaaggtctattccctgtggacagatttgatgatcgaatacctgccatgatcatcaaacatcaattgtacagt atactgccaaacagaacgctggtcgataaacagttgggtgttacgacggatctcaggacacctaaacctgtcattgagaa atttacccagtcactgataacaaaacacagggatgtgtgtataagtaaagaaaccctgatggaagagtaccagtttactg atcaagaaatcacacatctagtgaaagcgtcagtattaacagtgaagacaattggaggatggtggatagccgtacctaat gccggaatcttcatgaaaagttttctcaggggaaggaaggctctactcaggatgattagtaaaagtaaatacaaagaaat actcaggaaggagctggaacaaaggaaatggccaaagatctgtaagctaggtttaatgtatcatctccatgatgtgatag gagcagatctgatacaatgcatagagacaactagcgggcagttactgagactgaaggatagctaa |
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Protein
| Protein ID | pfu_aug2.0_340.1_00627.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00627.t1 MSRKRALVNDLYKSKKRICAALNSDAKNSDLITEEAGSSYKADDIPCDTKVALLHLQGLFPVDRFDDRIPAMIIKHQLYS ILPNRTLVDKQLGVTTDLRTPKPVIEKFTQSLITKHRDVCISKETLMEEYQFTDQEITHLVKASVLTVKTIGGWWIAVPN AGIFMKSFLRGRKALLRMISKSKYKEILRKELEQRKWPKICKLGLMYHLHDVIGADLIQCIETTSGQLLRLKDS |
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