Gene
| Gene Model ID | pfu_aug2.0_340.1_00631 |
|---|---|
| Locus | scaffold340.1 : 167997 ... 169775 : - |
| To GenomeBrowser | scaffold340.1:167997..169775 |
| Genes list of scaffold | scaffold340.1 |
| Synonym | pfu_aug1.0_7.1_14637 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_340.1_00631.t1 | 1 | 1 | C1q | 63 | 185 | 1.9e-21 | 76.4 | 1.7e-25 | 2.5e-21 | 76.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_340.1_00631.t1 | gi|597779224|ref|XP_007253227.1| | PREDICTED: complement C1q-like protein 2-like [Astyanax mexicanus] | 2.0e-13 |
| pfu_aug2.0_340.1_00631.t1 | gi|499009241|ref|XP_004556914.1| | PREDICTED: uncharacterized protein LOC101467498 [Maylandia zebra] | 1.0e-12 |
| pfu_aug2.0_340.1_00631.t1 | gi|499051588|ref|XP_004576299.1| | 4.0e-12 | |
| pfu_aug2.0_340.1_00631.t1 | gi|675878218|ref|XP_009024669.1| | hypothetical protein HELRODRAFT_193289 [Helobdella robusta] | 4.0e-12 |
| pfu_aug2.0_340.1_00631.t1 | gi|597779433|ref|XP_007253324.1| | PREDICTED: complement C1q-like protein 4-like [Astyanax mexicanus] | 6.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_340.1_00631.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00631.t1 atgctgaatttactgttcctgagttatctcccattcctggtaatggttcatgggaaaacagagaaagacacagatgcatt aatacacgtcattctgagagagcaagcttctatgattaaacactgcatgtcaaatgtgtgcacacatcctaatagaccag agaagccatgggatagacaaatggttgctttcagtgcctatccagaaaatgagctcaagagcacttcagccaacacaaag atagtttttggaaaaactcgtacaaatattggtaatgcctacaatccgaccactggagttttcacagcaccaataactgg ggtctatgcttttcattggacaataatggttctgaatggaaaatattcaggcatctacattcaagtgaatgggaagaacc aagtttatctgtatggttatgctaaaggttatccaacttggtattccccaagtcagtcgtacgtaactgccctcaaaagg ggggatacagtaaaccttttatcaagcaattctttagggtatatctacccatactcaacatttactggatacagattgta a |
|
Protein
| Protein ID | pfu_aug2.0_340.1_00631.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00631.t1 MLNLLFLSYLPFLVMVHGKTEKDTDALIHVILREQASMIKHCMSNVCTHPNRPEKPWDRQMVAFSAYPENELKSTSANTK IVFGKTRTNIGNAYNPTTGVFTAPITGVYAFHWTIMVLNGKYSGIYIQVNGKNQVYLYGYAKGYPTWYSPSQSYVTALKR GDTVNLLSSNSLGYIYPYSTFTGYRL |
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