Gene
| Gene Model ID | pfu_aug2.0_340.1_00633 |
|---|---|
| Locus | scaffold340.1 : 196548 ... 211231 : + |
| To GenomeBrowser | scaffold340.1:196548..211231 |
| Genes list of scaffold | scaffold340.1 |
| Synonym | pfu_aug1.0_7.1_14634 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_340.1_00633.t1 | 2 | 1 | adh_short | 17 | 100 | 2.4e-07 | 30.8 | 8.9e-10 | 2.6e-06 | 27.4 |
| pfu_aug2.0_340.1_00633.t1 | 2 | 2 | adh_short | 105 | 151 | 2.4e-07 | 30.8 | 0.1 | 300.0 | 1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_340.1_00633.t1 | gi|676463401|ref|XP_009056585.1| | hypothetical protein LOTGIDRAFT_232968 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_340.1_00633.t1 | gi|676447496|ref|XP_009051426.1| | hypothetical protein LOTGIDRAFT_152655 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_340.1_00633.t1 | gi|676447493|ref|XP_009051425.1| | hypothetical protein LOTGIDRAFT_181561 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_340.1_00633.t1 | gi|390353631|ref|XP_001199010.2| | 0.0 | |
| pfu_aug2.0_340.1_00633.t1 | gi|196002139|ref|XP_002110937.1| | hypothetical protein TRIADDRAFT_54391 [Trichoplax adhaerens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_340.1_00633.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00633.t1 atgggcggaggtagttctttcccacgggcacctatccccagggatagggtatttattgtgacaggtggaaactcaggaat tggttacgaaacatcaaaatgggtagccatgatgggaggtcacgtgatcatagcttgcagatcagaaagcagagccaaag aggcaatagagaaaatgaagtccgaattcgcagaagaaaagaaaaaagggacaacaggcataataactgaaggggacatc aatgtggaattcatgcatttagacttagcctcgttctcatctgttatgacgttcattgatgcttttaaagcttccgaatt taccgaagacgagaacgagatgatgtttcaggctaattacttggctcacttactgatcaccatcaagcttctacccatca tgcagaagtctggagaagacttacggatcgtcaacaactctagctttgctcatgagtatacaggcttcgacacaaacaac attcaaggaaagaaggaaaatttcgatgcatgggacagttacagcaaatccaagggatatcagatcctgcaaatgtatac aatgaataggaaattgcgaagcaaagacgttaccataaactgtataaacccagggtttgtaaagactcccttcgacagga cgttccctggaggatgtttgagctgtttagttagttgctatagaggatgtggttgtgcccataagccatcggaaggaggt gcagcgctgacagatgccgctataaatcctaaatataaggacagaagggacgtatacatatcagaactaaaggagaaaca aactaaagcttacacaagggatcaggaaaatcaagaaactttatggaagtactcaattgagaaactcagtaaatatctaa ctgaagaggatatgtctatttttgaccccgcgaagtga |
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Protein
| Protein ID | pfu_aug2.0_340.1_00633.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00633.t1 MGGGSSFPRAPIPRDRVFIVTGGNSGIGYETSKWVAMMGGHVIIACRSESRAKEAIEKMKSEFAEEKKKGTTGIITEGDI NVEFMHLDLASFSSVMTFIDAFKASEFTEDENEMMFQANYLAHLLITIKLLPIMQKSGEDLRIVNNSSFAHEYTGFDTNN IQGKKENFDAWDSYSKSKGYQILQMYTMNRKLRSKDVTINCINPGFVKTPFDRTFPGGCLSCLVSCYRGCGCAHKPSEGG AALTDAAINPKYKDRRDVYISELKEKQTKAYTRDQENQETLWKYSIEKLSKYLTEEDMSIFDPAK |
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