Gene
| Gene Model ID | pfu_aug2.0_340.1_00634 |
|---|---|
| Locus | scaffold340.1 : 216829 ... 232907 : - |
| To GenomeBrowser | scaffold340.1:216829..232907 |
| Genes list of scaffold | scaffold340.1 |
| Synonym | pfu_aug1.0_7.1_14634 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_340.1_00634.t1 | 1 | 1 | adh_short | 17 | 173 | 3.1e-14 | 53.2 | 2.3e-17 | 5.7e-14 | 52.3 |
| pfu_aug2.0_340.1_00634.t1 | 1 | 1 | KR | 18 | 127 | 1.2e-07 | 31.5 | 1.1e-10 | 2.7e-07 | 30.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_340.1_00634.t1 | gi|585705817|ref|XP_006823711.1| | PREDICTED: retinol dehydrogenase 12-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_340.1_00634.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00634.t1 atgggtggaagtagctccttccctatgatttctatccccagagatagggtgtttgttgtgacaggtggaaactcaggaat cggttatgaaacatcaaaatggatagccatgatgggaggtcacgttattatagcttgcagatcggaaataagagcgaaag aggcaattgagaaaatgagggcagatttcgcggaagaaaagagtaaagggaccaaaggcataatcactgagggggagata aacgtggaattcatgcagttagacttagcctcgctttcatctgtgatggcgttcattgaagcttttaaagcgtccggtaa aaaattgcatgtgttgctgtgtaatgcaggactagtgcacgagttagaatttacagaggacgaaaatgagctaatgtttc agactaactacttgggtcacttactgatcaccatcaagcttctacccatcatgcagaattctggggaagacttacggatc gtcaacaactctagcctagctcatggctataccaattttgacatgaacaacattcaaggaaagaaggaaaattttaatgc atgggattattacagcaaatctaaaggatatcagattttacaaatgtataccatgaatagaaaattgcaaagaaagggtg tctctattaactgtatcaaccctgggattgtagaaagtcccttccatcgggcacaccccagaggctggatgtcctgtgca atatcatgttccagtggatgcgggtgcacgaatgcgcagtctgaaggaggcgcagcgctgatagacgccgccgtaaatcc taaatatgaaggcagaggtgacttgtatatatctgaacttaaggtgaaatcaactaaagcttacacaaggaaaagagaaa atcaagaagctttatggaaatactcgatggagaaactcagtaaatatctaaatgaagaggacatggcgatttttgacccc gagaagtga |
|
Protein
| Protein ID | pfu_aug2.0_340.1_00634.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_340.1_00634.t1 MGGSSSFPMISIPRDRVFVVTGGNSGIGYETSKWIAMMGGHVIIACRSEIRAKEAIEKMRADFAEEKSKGTKGIITEGEI NVEFMQLDLASLSSVMAFIEAFKASGKKLHVLLCNAGLVHELEFTEDENELMFQTNYLGHLLITIKLLPIMQNSGEDLRI VNNSSLAHGYTNFDMNNIQGKKENFNAWDYYSKSKGYQILQMYTMNRKLQRKGVSINCINPGIVESPFHRAHPRGWMSCA ISCSSGCGCTNAQSEGGAALIDAAVNPKYEGRGDLYISELKVKSTKAYTRKRENQEALWKYSMEKLSKYLNEEDMAIFDP EK |
|