Gene
| Gene Model ID | pfu_aug2.0_3407.1_25740 |
|---|---|
| Locus | scaffold3407.1 : 39746 ... 63487 : + |
| To GenomeBrowser | scaffold3407.1:39746..63487 |
| Genes list of scaffold | scaffold3407.1 |
| Synonym | pfu_aug1.0_1847.1_51449 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3407.1_25740.t1 | 3 | 1 | A2M_N | 553 | 574 | 1.4e-15 | 57.3 | 0.19 | 2800.0 | -1.4 |
| pfu_aug2.0_3407.1_25740.t1 | 3 | 2 | A2M_N | 692 | 783 | 1.4e-15 | 57.3 | 7.5e-19 | 1.1e-14 | 54.4 |
| pfu_aug2.0_3407.1_25740.t1 | 3 | 3 | A2M_N | 805 | 821 | 1.4e-15 | 57.3 | 0.75 | 11000.0 | -3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3407.1_25740.t1 | gi|512810576|ref|XP_004876780.1| | 7.0e-28 | |
| pfu_aug2.0_3407.1_25740.t1 | gi|513005083|ref|XP_004864012.1| | 8.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_3407.1_25740.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3407.1_25740.t1 atggtaaactgtatcggtatggcaagtaacatctacagttacatgtacatgtaccacagtgttatcaaaattgatgcaag ctggatatgttgctattgtggcttaccgaatttttcaacatcattattcgaatcttttgtggttgacacatcaaattctt accatagcttaagctcatcccacgacaccacctgtagctctgaggacccaggctcaccacttcttgcatcatcgcctatt agatccaaggcaaagcataaagaaccacctaaacagagattccggatcttatcattgaacatccaaagtgtactatcaaa aatgtcaacttttgcaaatattgtcgactcgtctaatccagacattattgtagggacagagactttgctacgtcccgaaa tacatgatgcagaattcactccaccaggttatatggtcaaagcgaggagagatcagcatgacagatatggcggcgtcttc atcatgactaaggtcaacttaccatgtgactttaatctgcaagatatctcttggcctacatcatccatcagcggacatca gaatttagccactatcaacaacctgttccttacattaatcgcagactgcggcctacatcagatggttgattttaccacaa gaaacaacaacacacttgacttattcttcacaaaccgaccacctctcatcaaccgcaaaaagccaatgcctggaataagt gaccatgaggcgatatttattcatagtgacattcaggtcaagcttcagcgtccaactaggcaccagaaaccaaaacgcct ctggagtttcattaagagcacagatgttagtggtgtagctcctctcaaacgtgatggagtagtatatagtgatgcggcta ccaaggcaggcatactgaacaagcagttctcttcagtgttctctatagaagacccatctgtaaacatgccagaaatggaa cagagtccccatccagaagtagacaacatcactatacatgaggctggaatatgtaaattgctatccaacctccacccaca caaagcaacaggtcctgactctgtgtctcaacgtctccttaaagaaatatctcatgaactttcaccagctcagagtcttt tcttccaagcctcactagatcaagtcacagtaccatcagactggaaggcagcaaacatcactcccttgtttaagaaggga gaaaggagtatgacagtaaactatcgcccagtatctctgacatcattctgtagagaggtcctcaatatcacagactctgc taaatacttggggctgaacatccataaaagcttaggctgcgacactcacatagacaagatcacgaagaaggcaaactcaa ccatggccttcctaggcagggacatccgccattgcccaattaacatcaaggcacactgttatacaacccttgtcagaccc agcctggaatacgcagcaagtgtctggaatccttccaagaaagacagcatcaacaagctggaagctgtcgaaagaagagc tgccagattcgccactggagactaccagcgcacaaccatacgcctgtggactctgctccctggatacataatggactctg acaccctggacagtttcaaagctgagctgtccgggtaccacctcatctcttacatcatccttacaccaaaaacaattcga cctggggaaaaggccaacattgcagtgaacattcttgacaacttggcaaaagacgctgacgcaaatatagttgcaacact tttggatcactatgaccatgttctctctcaggcatccgacaattttcgccttcttgaacctcgtgctcttcagttgatgg ttaaagtaatgtctacggacgacgacgatgacgacaacgacaacgacgctgaggatgaagaaaaaaatagcatacgggta cacagttttataaatgatcaagatgtggctccaaacataaggattccaacgaatatcgatgcattatctcaacatcaaat aagagttgagggaaaaagtggacttttgttctataatacaacggatgttgacgttgaaaccaagtacttgtccctgttaa ctcagactgataaaggaatgtacaaggctggtcagtcagtgcacataaggagttttggactccatcccaacggaagtgtt ttctatggaaatatttcacttgaagtcattgatccaaagggcaatataatcaagcaatggaaggacttacgggacccaat gtacggtgtcgtcaataagactttcttcatggacgataaacctgtattaggaaagtggacaatcaaggcttcatcagggg acatgtcaacagaaactacgtttgaagtgtcggaatatgttcttccaaaattaaaacttgacatgaccctacccgggtat gtaatgataaaagacaaggacgtgaccgggacattttctgccaagtatactttcggtaaggaggctgagggacaactcaa acttaatgtgaagatacctggcctcagatcgagatatgactattggcactggagtgatgacatataccctgcatacacac agtcaatgcat |
|
Protein
| Protein ID | pfu_aug2.0_3407.1_25740.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3407.1_25740.t1 MVNCIGMASNIYSYMYMYHSVIKIDASWICCYCGLPNFSTSLFESFVVDTSNSYHSLSSSHDTTCSSEDPGSPLLASSPI RSKAKHKEPPKQRFRILSLNIQSVLSKMSTFANIVDSSNPDIIVGTETLLRPEIHDAEFTPPGYMVKARRDQHDRYGGVF IMTKVNLPCDFNLQDISWPTSSISGHQNLATINNLFLTLIADCGLHQMVDFTTRNNNTLDLFFTNRPPLINRKKPMPGIS DHEAIFIHSDIQVKLQRPTRHQKPKRLWSFIKSTDVSGVAPLKRDGVVYSDAATKAGILNKQFSSVFSIEDPSVNMPEME QSPHPEVDNITIHEAGICKLLSNLHPHKATGPDSVSQRLLKEISHELSPAQSLFFQASLDQVTVPSDWKAANITPLFKKG ERSMTVNYRPVSLTSFCREVLNITDSAKYLGLNIHKSLGCDTHIDKITKKANSTMAFLGRDIRHCPINIKAHCYTTLVRP SLEYAASVWNPSKKDSINKLEAVERRAARFATGDYQRTTIRLWTLLPGYIMDSDTLDSFKAELSGYHLISYIILTPKTIR PGEKANIAVNILDNLAKDADANIVATLLDHYDHVLSQASDNFRLLEPRALQLMVKVMSTDDDDDDNDNDAEDEEKNSIRV HSFINDQDVAPNIRIPTNIDALSQHQIRVEGKSGLLFYNTTDVDVETKYLSLLTQTDKGMYKAGQSVHIRSFGLHPNGSV FYGNISLEVIDPKGNIIKQWKDLRDPMYGVVNKTFFMDDKPVLGKWTIKASSGDMSTETTFEVSEYVLPKLKLDMTLPGY VMIKDKDVTGTFSAKYTFGKEAEGQLKLNVKIPGLRSRYDYWHWSDDIYPAYTQSMH |
|