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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3411.1_05825
Locus scaffold3411.1 : 29826 ... 55643 : +
To GenomeBrowser scaffold3411.1:29826..55643
Genes list of scaffold scaffold3411.1
Synonym pfu_aug1.0_18038.1_18499

Manual annotation
Annotation by Blast2GO
Annotation GO
multiple epidermal growth factor-like domains protein partial GO:0016020

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_3411.1_05825.t1 gi|512940001|ref|XP_004934372.1| 2.0e-17
pfu_aug2.0_3411.1_05825.t1 gi|148683401|gb|EDL15348.1| RIKEN cDNA 3110045G13, isoform CRA_a [Mus musculus] 2.0e-16
pfu_aug2.0_3411.1_05825.t1 gi|512863074|ref|XP_002939036.2| 3.0e-16
pfu_aug2.0_3411.1_05825.t1 gi|449662752|ref|XP_004205606.1| 1.0e-15
pfu_aug2.0_3411.1_05825.t1 gi|755855925|ref|XP_011296365.1| PREDICTED: multiple epidermal growth factor-like domains protein 10 isoform X4 [Musca domestica] 2.0e-15

Transcript
Transcript IDpfu_aug2.0_3411.1_05825.t1
Definition-
>pfu_aug2.0_3411.1_05825.t1
atggatttgatgacgtcacaatgccttgacgtcatatacctgcacaaatgggaagtaactctgtatttcgaaaagaccga
attaacagtatttgccccacagctgcaaccgagtctcgttagagattcccttccttttccaggatttactcagactggca
ttcaatttgtttcagagtgtgatgaaggttggtatggcgtcgaatgcaaaaataactgtgtttgtccaaacaattcgact
tgtaaccacatcgatggtatttgcgtttgcagcgaaggactacgaggaaatgactgcttagaggaatgcgagaaatttac
attcggtgagaattgcggctcgaattgtagttgcaataggaataatactgaaaactgtaatccagtttcgggtgtctgta
attgtaaatctggctggacaggacctgattgtacctccgacgtttgtcatgccatagggacagaaaattgtgcatttaaa
acactgagttgcccagaacagccaccgaatacgacatacgatagaaatatcacgacttttctagagaagtttttcacatc
agaagaaaacacaagtaccagcaacaatcagcctctagttaatacagatagcagtcaaataagtgaaggtagtacaggga
tcgttgccggagtcagtggggcagcagtagttgttactttacttgtcgtcatagtgatcctttatatgagaggcagaaac
caaagacagacgaagacagttcacaataacacatatgctttgtcagctctccagataaatgaagacatcataacaggccc
aaatatgcaaagtaatgaaaaagaagaggaaacctatgacaaaatggacaggaatggcagcgctggaaatcaacaaagga
aagacgtgacgaaaaataatgctgttattgaagatacatacagtcacgcaacaagcggggcggactacgacaccatggga
aaagacctggcaggaagtgaaattgacaatgaatactctgttactggaagatcctcgtcacaagacgtttataaccatac
aactacagacaatcattatgacacagggcaagggttccaggcgaaagatgtcgctgaaagtgcatactgttcgatgagaa
atcagatggaagataatttgatgtcacaagataatacgtatgacagatcggaaaattacaatcagaggggaagcagcaaa
gacgatattgacaactatgactag

Protein
Protein IDpfu_aug2.0_3411.1_05825.t1
Definition-
>pfu_aug2.0_3411.1_05825.t1
MDLMTSQCLDVIYLHKWEVTLYFEKTELTVFAPQLQPSLVRDSLPFPGFTQTGIQFVSECDEGWYGVECKNNCVCPNNST
CNHIDGICVCSEGLRGNDCLEECEKFTFGENCGSNCSCNRNNTENCNPVSGVCNCKSGWTGPDCTSDVCHAIGTENCAFK
TLSCPEQPPNTTYDRNITTFLEKFFTSEENTSTSNNQPLVNTDSSQISEGSTGIVAGVSGAAVVVTLLVVIVILYMRGRN
QRQTKTVHNNTYALSALQINEDIITGPNMQSNEKEEETYDKMDRNGSAGNQQRKDVTKNNAVIEDTYSHATSGADYDTMG
KDLAGSEIDNEYSVTGRSSSQDVYNHTTTDNHYDTGQGFQAKDVAESAYCSMRNQMEDNLMSQDNTYDRSENYNQRGSSK
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