Gene
| Gene Model ID | pfu_aug2.0_3416.1_22370 |
|---|---|
| Locus | scaffold3416.1 : 1 ... 2657 : + |
| To GenomeBrowser | scaffold3416.1:1..2657 |
| Genes list of scaffold | scaffold3416.1 |
| Synonym | pfu_aug1.0_53336.1_41573 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3416.1_22370.t1 | 2 | 1 | Cadherin | 13 | 47 | 2.7e-11 | 43.5 | 2.4e-06 | 0.035 | 14.3 |
| pfu_aug2.0_3416.1_22370.t1 | 2 | 2 | Cadherin | 64 | 118 | 2.7e-11 | 43.5 | 1.7e-10 | 2.5e-06 | 27.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3416.1_22370.t1 | gi|675881778|ref|XP_009026391.1| | hypothetical protein HELRODRAFT_179299 [Helobdella robusta] | 3.0e-15 |
| pfu_aug2.0_3416.1_22370.t1 | gi|391338388|ref|XP_003743540.1| | PREDICTED: neural-cadherin-like [Metaseiulus occidentalis] | 1.0e-14 |
| pfu_aug2.0_3416.1_22370.t1 | gi|645002338|ref|XP_008209926.1| | PREDICTED: LOW QUALITY PROTEIN: neural-cadherin [Nasonia vitripennis] | 1.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_3416.1_22370.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3416.1_22370.t1 gggcaaaatcatccttcgtcccaacacgaggattccggaaggcaccgatcgctacgaactaccagttgttgcgacagatg atggaagttgctgtgcctctgcacaaccacgtagcagctcagcaaccgttgtgattaacattatcgatgctgtaaatctg aagcctaattttgtaaattgcgctagctatgcatctacggtattagaggatcaggaacctggagctgtggttaccaaggt ttcggcgacagatcaaaacagaggagaaaatggagtggtagaatactacatcatagaggaccagaaaaataccgcagcgt tattctctataaacaatatgacagatactttagtatgttcggagaaggatctgccctaa |
|
Protein
| Protein ID | pfu_aug2.0_3416.1_22370.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3416.1_22370.t1 GKIILRPNTRIPEGTDRYELPVVATDDGSCCASAQPRSSSATVVINIIDAVNLKPNFVNCASYASTVLEDQEPGAVVTKV SATDQNRGENGVVEYYIIEDQKNTAALFSINNMTDTLVCSEKDLP |
|