Gene
| Gene Model ID | pfu_aug2.0_3422.1_09137 |
|---|---|
| Locus | scaffold3422.1 : 31386 ... 32673 : + |
| To GenomeBrowser | scaffold3422.1:31386..32673 |
| Genes list of scaffold | scaffold3422.1 |
| Synonym | pfu_aug1.0_2350.1_08302 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3422.1_09137.t1 | 1 | 1 | Retrotrans_gag | 120 | 211 | 2.0e-07 | 30.9 | 6.0e-11 | 4.4e-07 | 29.8 |
Transcript
| Transcript ID | pfu_aug2.0_3422.1_09137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3422.1_09137.t1 atggctattatatctgagcaccgaaaaaaaaattccggcatgaccacgccgaaggattatgtgatcaacataggggaccc tctctctaatgaacaaatagctagacgtctctcatttagtgactctttaaatgatgatttgcaatcgctgagtgacccat ttgattttaattatttccgtacttgttatacgagtagatcgaaacaagagaacatgacttttccccagtttatgatgcca atgccattacacttaagaacattccaaaggtacaatgaagaggatggtgagaaatttttaaatgactttattgcattttc cacgatgagcggtttcgacgatgaccgaagggtgtcggcattctcactgtatcttgctggccctgcatacaactggtaca aaatattagactgtgatatacagagaaactgggattttctgaaggaaagctttattgagaattacgcaacggcaaatgat gcattgctttactccgaactccaattgtataacgagttgaagttaactgagaaaatgaactttgaggactaccacagcga aatacttaagcgtggtcgaaagctgaagaagaccgaaccagacatgatgtcgagatttattgatgggcttcaaaggggct tgaaattcttccacatcgttagcagatgccatgcagagtgcgcgaatgggcgatgcgtgtggttacaggaaggacatggg accggtagctgttcccgggaagatggaaaccccaaccgtttgcgcgatcgaaaagtacaaagggaggatcgcctttgcaa gatcgagcaacaagtagaggtcgtgatgcaatctctctccaagcttcccgatggaccagttgattcttctcctcgcgcgc gtcgtgaatgtcacaagtgcggtgggaaagaccatttcaagaacaggtgcaagtggaacggacacggtgtgcgttcaccg gacacaatgtgtcaaatctgtacacaaaatggacacggtgctaaagaatgcattgactttcagtttacacggggaaacga caaaaccccaggcgagacgcgccctcgcctgggcccttaa |
|
Protein
| Protein ID | pfu_aug2.0_3422.1_09137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3422.1_09137.t1 MAIISEHRKKNSGMTTPKDYVINIGDPLSNEQIARRLSFSDSLNDDLQSLSDPFDFNYFRTCYTSRSKQENMTFPQFMMP MPLHLRTFQRYNEEDGEKFLNDFIAFSTMSGFDDDRRVSAFSLYLAGPAYNWYKILDCDIQRNWDFLKESFIENYATAND ALLYSELQLYNELKLTEKMNFEDYHSEILKRGRKLKKTEPDMMSRFIDGLQRGLKFFHIVSRCHAECANGRCVWLQEGHG TGSCSREDGNPNRLRDRKVQREDRLCKIEQQVEVVMQSLSKLPDGPVDSSPRARRECHKCGGKDHFKNRCKWNGHGVRSP DTMCQICTQNGHGAKECIDFQFTRGNDKTPGETRPRLGP |
|