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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_343.1_10634
Locus scaffold343.1 : 12636 ... 37809 : +
To GenomeBrowser scaffold343.1:12636..37809
Genes list of scaffold scaffold343.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_343.1_10634.t1 gi|532042483|ref|XP_005364073.1| PREDICTED: C-type lectin domain family 4 member M-like [Microtus ochrogaster] 1.0e-26
pfu_aug2.0_343.1_10634.t1 gi|694988127|ref|XP_009438544.1| PREDICTED: uncharacterized protein LOC104004268 [Pan troglodytes] 5.0e-26
pfu_aug2.0_343.1_10634.t1 gi|672016351|ref|XP_008773493.1| PREDICTED: uncharacterized protein LOC103691716 isoform X1 [Rattus norvegicus] 9.0e-19
pfu_aug2.0_343.1_10634.t1 gi|672044383|ref|XP_008759757.1| PREDICTED: uncharacterized protein LOC103691715 [Rattus norvegicus] 1.0e-18
pfu_aug2.0_343.1_10634.t1 gi|156387464|ref|XP_001634223.1| predicted protein [Nematostella vectensis] 4.0e-18

Transcript
Transcript IDpfu_aug2.0_343.1_10634.t1
Definition-
>pfu_aug2.0_343.1_10634.t1
atggacagcaagcagacacatgaacagctagtagaagttagtggaaggtatggacaactagtagaagttagaggaaggca
tggacagctagtagaagttagaggaaggcatggacagctagtagaagttagcggaaggctaggacagctagtagaagtaa
gaggaaggcaggaacagctagtagaagttagcggaaggcatggacagctagtagaagttagcggaaggcatggacagcta
gtagaagttagaggaagtcagagacagcttatttatggaggaaggcaggaacagctagtagaagttagaggaagacagga
acagctagtagaagttagaggaaggcatggacagctagtagaagttagaggaaggcaggaacagctagtaaaagttagag
gaaggcaggaacagctagtagaaattagaggaagacatggacaactagtagaagttagaggaaggcatggtcaactagta
gaagttagaggaaggcatggacaactagtagaagttagaggaaggcatggccagctagtagaagttagaggaagtcagag
acagctaatttatgtagaaaggcatggacaatcctatcagtatatagatggaggaggaggtggccagactaccaagtttt
taatggtagttgatactgaaaggttgatgcagaagctctatacatag

Protein
Protein IDpfu_aug2.0_343.1_10634.t1
Definition-
>pfu_aug2.0_343.1_10634.t1
MDSKQTHEQLVEVSGRYGQLVEVRGRHGQLVEVRGRHGQLVEVSGRLGQLVEVRGRQEQLVEVSGRHGQLVEVSGRHGQL
VEVRGSQRQLIYGGRQEQLVEVRGRQEQLVEVRGRHGQLVEVRGRQEQLVKVRGRQEQLVEIRGRHGQLVEVRGRHGQLV
EVRGRHGQLVEVRGRHGQLVEVRGSQRQLIYVERHGQSYQYIDGGGGGQTTKFLMVVDTERLMQKLYT

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