Gene
| Gene Model ID | pfu_aug2.0_343.1_10640 |
|---|---|
| Locus | scaffold343.1 : 199868 ... 241112 : + |
| To GenomeBrowser | scaffold343.1:199868..241112 |
| Genes list of scaffold | scaffold343.1 |
| Synonym | pfu_aug1.0_3430.1_01452 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_343.1_10640.t1 | 1 | 1 | R3H | 186 | 246 | 1.8e-13 | 49.9 | 5.6e-17 | 4.1e-13 | 48.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_343.1_10640.t1 | gi|719765864|ref|XP_010217506.1| | PREDICTED: cAMP-regulated phosphoprotein 21 [Tinamus guttatus] | 0.0 |
| pfu_aug2.0_343.1_10640.t1 | gi|542154197|ref|XP_005485950.1| | PREDICTED: cAMP-regulated phosphoprotein 21 isoform X11 [Zonotrichia albicollis] | 0.0 |
| pfu_aug2.0_343.1_10640.t1 | gi|542154187|ref|XP_005485945.1| | PREDICTED: cAMP-regulated phosphoprotein 21 isoform X6 [Zonotrichia albicollis] | 0.0 |
| pfu_aug2.0_343.1_10640.t1 | gi|733893323|ref|XP_010711308.1| | PREDICTED: cAMP-regulated phosphoprotein 21 isoform X6 [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_343.1_10640.t1 | gi|733893318|ref|XP_010711306.1| | PREDICTED: cAMP-regulated phosphoprotein 21 isoform X4 [Meleagris gallopavo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_343.1_10640.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_343.1_10640.t1 atgacaatggccgcagctacagaatatagacaagactcaagggggaaaggggctgtactctaaaaagagcatcagtccct gagagaagccagtgatgtaaggagttcttctaaccatagccatgaacaatgtaccgctgaagtcagaataaatgatggtc catctagtcccaccaatcatgtacaggtacctcagaaagtaaagcagctacagagaagtaaggcatttgaagagtcgcct ccccctgaacaacatacattattaccacaggctaacggattgggtcagaaatcattggtacctcagaaagtaaagcagct acagagaagtaaggcatttgaagagtcgcctccccctgaacaacatacattattaccacaggctaacggattgggtcaga aatcattggagttggtacctctcagtacagtcatatatcctcatcttttcaaagtactaatagattccagtttcgataaa agtccatataaggattcaacgggtatcaacttggaggactttatacataagactataaataaatcgcctaaagacagaac tatgctgctcaagctggaaacagatctgattaactttgttaacgaacctaaacaccattacttgaagtttccacctatgt catcgtatgataggatgcttgtccacagaattgctgctttctttggcttggatcacaatgtagaccaaactggaaaaagt gtcatcgttaataaaacatcaaataaacgaatccctgacttcagttttagtgagcatattgacaacatggagatgggtga tcgtaaatcagctccaataaaggtgatgaagcgagggggacttagtctggacgataaagagagttactgtaagacactag agaaaccactactagctaacaccaaggccaggtcgtttgaagaacgtaaaaaacagtacgataaagtcagatcaaagatc tttaacagctgtgatgagccaatggcttattctgaagaggaagccacaagtataatgccaagcataattaagaagcccca aagaccgtcaagtttaagtaaaaattctgacggaccaccgtggagtagtacagactctagtggatacggcacagactgct ctagtaaatccagaggcattccaaaggctaatagtttcggagggattccacataatcaaattaaagctcccttaaaaagc cagagtttatgtaaaacagattctgtgagttctggtacccagagtcctaatgtagctcatgtaatagctgctcccacccc accaggaagtagatctgacagctctcctctctcacgtagcagctctactggtcccatacagtccccacttaatcaaggtt atccccctggtcaaggccagcaggtattttgggtggcgtcagattacagaaatatacccccaggaagtgtcataataaat caacaaactggtcagccatataccaatccagatggtagtatatacacatataaccctaatcaaccccctcctgttacaca ccagcagcctactatgtatgccccaccccagccacccacccctcaggaaatgtggacatctaatcagcctcagttttacc agaatcagaacattgcaggtcaaccaaatgtgcgttatgtatacccagtgaattatcaagtagcaggtcaaggtcaggga tctcaggtgcctgttgctactgacaaccaaaatcagactataacacagaatataggccaaccgtttgtaacgcaatatgg acctagttgtagtggagtgcccatgcctagtgcgcagaacgttgacacttaccctaatttctcatcccagtctacatatt ccattccccaaagtgaaaatttacagaattttcagtcttcatatcctttaccttttagccaaagtagttttgtacaaaac ccctcacaagtgttctattctaatgtaccatgttcacaaacagtaccaggatattcttatggaacaaaccagggaccgta tcaaagtggcacaacgccacctagtcaacaacctccccagcctcaaagtgcaaatctacccgtacagacattacaaggac agcaagtgaatgtggtaccagctgtacaaacaccttcagctccgcaattcacctccttatatcccaacatgcaacagcaa tgtcaaggacaaccacaatttaggcaatcaaatcctgcagtattgcaaattcctggagttcagcagcagcataatctaaa tctaaacccagttggtgtgagtcaaacatttcccccggttatacggaatatgcaaattaacatgcccatggcgggtcaag ctccgcagggctacgtgccacaatcaggtcaagttactgttagtgctaaaggtatgaccctagacaatcagatacccaaa atagaatcaggggcagataacaaggaatatgtgctcggcggcattggaagttttaacgctcctgtggtggcaggtccacc gcgccccatgacccagattctacgaccaccaactcagattacaccagatctgcgtattataggacagccgtctattagag ctcctatacaacacatacagttacatcccacaacacttggtcagccacaaaaacctagagttgtaaacaatgtccctaaa actcagcgactttgtaaatctgacagcaaggaaggatctgagagctcttcacacagtatggatcccccctgccaaggtga cacattagaagtgtatgacctccccaacacaatgatgaggtcagaggttgaggtcatcctatgtaaccttgtcaatgcag gagcccaaatacagntatatttccagtga |
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Protein
| Protein ID | pfu_aug2.0_343.1_10640.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_343.1_10640.t1 MTMAAATEYRQDSRGKGAVLXKEHQSLREASDVRSSSNHSHEQCTAEVRINDGPSSPTNHVQVPQKVKQLQRSKAFEESP PPEQHTLLPQANGLGQKSLVPQKVKQLQRSKAFEESPPPEQHTLLPQANGLGQKSLELVPLSTVIYPHLFKVLIDSSFDK SPYKDSTGINLEDFIHKTINKSPKDRTMLLKLETDLINFVNEPKHHYLKFPPMSSYDRMLVHRIAAFFGLDHNVDQTGKS VIVNKTSNKRIPDFSFSEHIDNMEMGDRKSAPIKVMKRGGLSLDDKESYCKTLEKPLLANTKARSFEERKKQYDKVRSKI FNSCDEPMAYSEEEATSIMPSIIKKPQRPSSLSKNSDGPPWSSTDSSGYGTDCSSKSRGIPKANSFGGIPHNQIKAPLKS QSLCKTDSVSSGTQSPNVAHVIAAPTPPGSRSDSSPLSRSSSTGPIQSPLNQGYPPGQGQQVFWVASDYRNIPPGSVIIN QQTGQPYTNPDGSIYTYNPNQPPPVTHQQPTMYAPPQPPTPQEMWTSNQPQFYQNQNIAGQPNVRYVYPVNYQVAGQGQG SQVPVATDNQNQTITQNIGQPFVTQYGPSCSGVPMPSAQNVDTYPNFSSQSTYSIPQSENLQNFQSSYPLPFSQSSFVQN PSQVFYSNVPCSQTVPGYSYGTNQGPYQSGTTPPSQQPPQPQSANLPVQTLQGQQVNVVPAVQTPSAPQFTSLYPNMQQQ CQGQPQFRQSNPAVLQIPGVQQQHNLNLNPVGVSQTFPPVIRNMQINMPMAGQAPQGYVPQSGQVTVSAKGMTLDNQIPK IESGADNKEYVLGGIGSFNAPVVAGPPRPMTQILRPPTQITPDLRIIGQPSIRAPIQHIQLHPTTLGQPQKPRVVNNVPK TQRLCKSDSKEGSESSSHSMDPPCQGDTLEVYDLPNTMMRSEVEVILCNLVNAGAQIQXYFQ |
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