Gene
| Gene Model ID | pfu_aug2.0_343.1_10641 |
|---|---|
| Locus | scaffold343.1 : 252131 ... 288907 : - |
| To GenomeBrowser | scaffold343.1:252131..288907 |
| Genes list of scaffold | scaffold343.1 |
| Synonym | pfu_aug1.0_3430.1_01453 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_343.1_10641.t1 | 4 | 1 | CUB | 238 | 284 | 6.8e-11 | 42.2 | 0.0057 | 17.0 | 5.5 |
| pfu_aug2.0_343.1_10641.t1 | 4 | 2 | CUB | 337 | 419 | 6.8e-11 | 42.2 | 1.8e-06 | 0.0053 | 16.8 |
| pfu_aug2.0_343.1_10641.t1 | 4 | 3 | CUB | 441 | 530 | 6.8e-11 | 42.2 | 2.9e-05 | 0.087 | 12.9 |
| pfu_aug2.0_343.1_10641.t1 | 4 | 4 | CUB | 536 | 582 | 6.8e-11 | 42.2 | 0.00022 | 0.66 | 10.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_343.1_10641.t1 | gi|498992328|ref|XP_004552739.1| | 4.0e-24 | |
| pfu_aug2.0_343.1_10641.t1 | gi|658861177|ref|XP_008413347.1| | PREDICTED: uncharacterized protein LOC103468223 [Poecilia reticulata] | 2.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_343.1_10641.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_343.1_10641.t1 atgtcacatgaattagacaagccccgacggtataactgcgtttctaacagtatatccaacatatgcctgtcggaaccaca aaacacagtacgtttatcctctaagtggaaggactacatcaaacctttagttcacacctatatctgcacaagacatgaaa gtaccagcttctctccatatttcatcatatttggaaggggacctcacacaccattagacttaatatttggaatcagcaga gaggataagcagataacatcgaagtatatatcagagttaaagaagcgaatggaaacagcaaacaagatggcacaaacagc agccaacaaggctagacaacaactgaaagaacattatgacaagagaactagagacatcaaactacaagaaggagatcaag tgttggtgaagatcgtatcatttgatggtcgacataagttagcagatcgctggaaacagattaccaaggaaagaacagag gaaactgatgatcgctttcatcatgatgaacaggaagacagtgattcagaagatataccagaacaaaatatcacagatga atgcggaataattatgagcccctcaataaatgagacaggagtattcatacacaacattttcccgtttatggaaacatcag tcttggttaaatcgattagactcaatttgtcagaacgcgaatcagttgtaggatgtggaaatggcaatcatgtatatgtc agcaagaaggatgataaaagatcagttccgtactgtggtaatgaaactattgatatatcaatatctggtgaacaaattat cgtgtacttcgttaagaaatcaaacgacagagcattcttcgaaatatcctacaaatagttgttttgttataaaaagggta taacgaccacgttaatgagtagtagtgccaagttttcgggtggctgtgctgtgttattaagtggttttggtttattaaaa gatcaaatcatcacgctactgagtggtaatgcaaaggcatatggagcttgtagtgaagtcttctctgagtcgaaaggtac aatcacttctgagaagtttcagtcgtctcgtacaaaaccacaaagatgtaacttcaaggttaatgtgacctcatcgacga tgatatcatttcttgagagtcatggacacggctgttatggaatgatcacaatttcagacggtacagaaataaattccatc tgtaattctggcaacaaaaccttcatgacaaagacagggccagttgatatcagatataatggcactggagtaatacgagc agattatatgaccataccaaatgacttcctccatacgactttaaaaggaagggaaggaaagttcggaccccgtctattta acaataaatatgcaaataatgccaactatacatttacaataacaactgataatggtggccgtgtcttagtgtatttccaa aatgtcagcttcgatacggaatgtaaagacgttttaagatatgatgaatacatattgtgcgaacacaatgcttcctctat aataatgtctgacgaagaagtcactgtctcctttattaccaatgttaccgggaccgggtcaggttttgatggtttctgga caacttgtggtggaaaatataaaaacaactacggtgtactgaagcaacctgatttgaatggtcaatccctaagagaggaa atacgttgtacgtatgacgtggagatacagaatacagaaattatttaccttaaaatagagaatacatccaacaatgtcat aaatgtaagtgaaatgattgtccataacaaagaaaacaatcagactgtaacagaatcaattactcttgacggagatcata tattcaaatcatacggagaaagcgttattacatacatatctggtagtggtaccaagttgaactttaaggctttttacaag cttcaaagcgaaaatgaagaagatgataatcatgaagaagataaaaatggagaggaagatcatgtatctaaatcagagga aactagcaatgacggaacaacatcagtaattatacccatatctattgtgattgctgtcgtcattgtgagtatcattggaa tagccttatactgttacagaaggaagaagacttcgactgccgattcattaaaacgaatctccgctgaaaaccaagcctat tttaacgatgaaaatcttggtggcaaatcaaatgaagccaatctagctgttgcctacgcagaaatacgtatagacaaaca cggagggaagagcacagtgatggtggtgaaggaggagaggtcggaatcggggctaaacatcaacaatactgtaaattcag aggtcgaacagagccagccaaacaaccaagtgaatcctgctcagagatgtgaatacgccacgccctgggacgccaagaat gaaagggataaaataactaaagtccttgagggaaactgtcctgatgaggcagatacctgtccagatgtagcaggcacctg tcctgacgtgacggcaacctatcttgacgtgacgggtacatgtcctgacgttactacaaacagtcttgctacagtggctg aaagagccgatgaatcctaa |
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Protein
| Protein ID | pfu_aug2.0_343.1_10641.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_343.1_10641.t1 MSHELDKPRRYNCVSNSISNICLSEPQNTVRLSSKWKDYIKPLVHTYICTRHESTSFSPYFIIFGRGPHTPLDLIFGISR EDKQITSKYISELKKRMETANKMAQTAANKARQQLKEHYDKRTRDIKLQEGDQVLVKIVSFDGRHKLADRWKQITKERTE ETDDRFHHDEQEDSDSEDIPEQNITDECGIIMSPSINETGVFIHNIFPFMETSVLVKSIRLNLSERESVVGCGNGNHVYV SKKDDKRSVPYCGNETIDISISGEQIIVYFVKKSNDRAFFEISYKXLFCYKKGITTTLMSSSAKFSGGCAVLLSGFGLLK DQIITLLSGNAKAYGACSEVFSESKGTITSEKFQSSRTKPQRCNFKVNVTSSTMISFLESHGHGCYGMITISDGTEINSI CNSGNKTFMTKTGPVDIRYNGTGVIRADYMTIPNDFLHTTLKGREGKFGPRLFNNKYANNANYTFTITTDNGGRVLVYFQ NVSFDTECKDVLRYDEYILCEHNASSIIMSDEEVTVSFITNVTGTGSGFDGFWTTCGGKYKNNYGVLKQPDLNGQSLREE IRCTYDVEIQNTEIIYLKIENTSNNVINVSEMIVHNKENNQTVTESITLDGDHIFKSYGESVITYISGSGTKLNFKAFYK LQSENEEDDNHEEDKNGEEDHVSKSEETSNDGTTSVIIPISIVIAVVIVSIIGIALYCYRRKKTSTADSLKRISAENQAY FNDENLGGKSNEANLAVAYAEIRIDKHGGKSTVMVVKEERSESGLNINNTVNSEVEQSQPNNQVNPAQRCEYATPWDAKN ERDKITKVLEGNCPDEADTCPDVAGTCPDVTATYLDVTGTCPDVTTNSLATVAERADES |
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