Gene
| Gene Model ID | pfu_aug2.0_344.1_14023 |
|---|---|
| Locus | scaffold344.1 : 76734 ... 101897 : + |
| To GenomeBrowser | scaffold344.1:76734..101897 |
| Genes list of scaffold | scaffold344.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_344.1_14023.t1 | 1 | 1 | PH | 6 | 107 | 2.1e-10 | 40.7 | 5.2e-14 | 3.8e-10 | 39.8 |
| pfu_aug2.0_344.1_14023.t1 | 2 | 1 | PH_11 | 7 | 58 | 4.8e-06 | 26.8 | 3.0e-09 | 2.2e-05 | 24.6 |
| pfu_aug2.0_344.1_14023.t1 | 2 | 2 | PH_11 | 85 | 106 | 4.8e-06 | 26.8 | 0.16 | 1200.0 | -0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_344.1_14023.t1 | gi|675882318|ref|XP_009026661.1| | hypothetical protein HELRODRAFT_193605 [Helobdella robusta] | 2.0e-35 |
| pfu_aug2.0_344.1_14023.t1 | gi|573900029|ref|XP_006637744.1| | PREDICTED: pleckstrin homology domain-containing family B member 2-like [Lepisosteus oculatus] | 6.0e-34 |
| pfu_aug2.0_344.1_14023.t1 | gi|524879469|ref|XP_005096410.1| | PREDICTED: pleckstrin homology domain-containing family B member 2-like [Aplysia californica] | 2.0e-33 |
| pfu_aug2.0_344.1_14023.t1 | gi|530577112|ref|XP_005282512.1| | PREDICTED: pleckstrin homology domain-containing family B member 2 isoform X2 [Chrysemys picta bellii] | 3.0e-31 |
| pfu_aug2.0_344.1_14023.t1 | gi|530577110|ref|XP_005282511.1| | PREDICTED: pleckstrin homology domain-containing family B member 2 isoform X1 [Chrysemys picta bellii] | 6.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_344.1_14023.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_344.1_14023.t1 atggcactggagattgccaaagctggttggctctacaggcaaagtaccattctaaaaagatggaaacacacatggtttgt cttgtatcaagatggagacctgcgatattttgagagcccagatcatcatgatcctgaagcaaggattgtagtgagagctg tgtgtaaagccatacagacaaatcatctggttgatgcagtgccaccagaagggaaaggcaaagattgcttgataaatctg atattgaaagatggagaactgaagttatgtgcagaggatccagatgatatgaaggcttggcacatagctttggaggaggc cagagtgatcccccctgccactaaccctccccctgtatcctggtcagggggtgtggtccatacttcctatggacaccaag ttgtgaaccacccaccagggacaaacgtggtctatgtgaaccagaatccttactatcatcgacgtcgctatgacagcact gatgttgccatgggagtggttgccggggccgccataggatccatgatgtggggaccatactggtggtag |
|
Protein
| Protein ID | pfu_aug2.0_344.1_14023.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_344.1_14023.t1 MALEIAKAGWLYRQSTILKRWKHTWFVLYQDGDLRYFESPDHHDPEARIVVRAVCKAIQTNHLVDAVPPEGKGKDCLINL ILKDGELKLCAEDPDDMKAWHIALEEARVIPPATNPPPVSWSGGVVHTSYGHQVVNHPPGTNVVYVNQNPYYHRRRYDST DVAMGVVAGAAIGSMMWGPYWW |
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