Gene
| Gene Model ID | pfu_aug2.0_3441.1_05830 |
|---|---|
| Locus | scaffold3441.1 : 6296 ... 12925 : - |
| To GenomeBrowser | scaffold3441.1:6296..12925 |
| Genes list of scaffold | scaffold3441.1 |
| Synonym | pfu_aug1.0_11695.1_32101 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3441.1_05830.t1 | 1 | 1 | RMP | 5 | 171 | 5.20022e-42 | 143.2 | 1.4013e-45 | 8.29989e-42 | 142.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3441.1_05830.t1 | gi|524873031|ref|XP_005093269.1| | PREDICTED: protein C8orf37 homolog isoform X9 [Aplysia californica] | 0.0 |
| pfu_aug2.0_3441.1_05830.t1 | gi|524873015|ref|XP_005093261.1| | PREDICTED: protein C8orf37 homolog isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_3441.1_05830.t1 | gi|291238250|ref|XP_002739042.1| | PREDICTED: protein C8orf37-like [Saccoglossus kowalevskii] | 9.80909e-45 |
| pfu_aug2.0_3441.1_05830.t1 | gi|260819374|ref|XP_002605012.1| | hypothetical protein BRAFLDRAFT_270207 [Branchiostoma floridae] | 9.94922e-44 |
| pfu_aug2.0_3441.1_05830.t1 | gi|543342110|ref|XP_005517455.1| | PREDICTED: protein C8orf37 homolog [Pseudopodoces humilis] | 2.00386e-43 |
Transcript
| Transcript ID | pfu_aug2.0_3441.1_05830.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3441.1_05830.t1 atggcagatgatattgatgatttgctggatgaagttgaaggaaggtttctgacaaaaaacaaatctaggtcgaaagattc aagtagaaaatccaaagaaaggaacactacagatgatgatatagatgacttactgaatgatatgacagtcgatccactac ctgtggatatgaaatgcatctcaagaaatgaatcattaagtatatgttttccagtttacctgggaggttctatgtgttca caaggaatggcaagctcacttagtaaaaaggcctgtgatagactgaggtgcacctcctgtgattttaaagtatattcatt tgacaatttccagtgggattcaaacacagattaccttttccttagaaataacgtcccagatttccatcgactgaagtcca atcttataccggcaaaaggttatagagcgtattgttgtcagtgttctcataggtctatattagaacttaccaagcttgaa gaccccaatctgaaatgggtgtgcggcaaacattga |
|
Protein
| Protein ID | pfu_aug2.0_3441.1_05830.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3441.1_05830.t1 MADDIDDLLDEVEGRFLTKNKSRSKDSSRKSKERNTTDDDIDDLLNDMTVDPLPVDMKCISRNESLSICFPVYLGGSMCS QGMASSLSKKACDRLRCTSCDFKVYSFDNFQWDSNTDYLFLRNNVPDFHRLKSNLIPAKGYRAYCCQCSHRSILELTKLE DPNLKWVCGKH |
|