Gene
| Gene Model ID | pfu_aug2.0_3441.1_05831 |
|---|---|
| Locus | scaffold3441.1 : 30606 ... 32358 : + |
| To GenomeBrowser | scaffold3441.1:30606..32358 |
| Genes list of scaffold | scaffold3441.1 |
| Synonym | pfu_aug1.0_11994.1_17807 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| activating transcription factor 7-interacting protein 1 isoform x2 | GO:0010468 GO:0044260 GO:0090304 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3441.1_05831.t1 | 2 | 1 | DUF3504 | 24 | 45 | 3.0e-06 | 27.1 | 0.11 | 850.0 | -0.4 |
| pfu_aug2.0_3441.1_05831.t1 | 2 | 2 | DUF3504 | 53 | 111 | 3.0e-06 | 27.1 | 1.7e-09 | 1.3e-05 | 25.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3441.1_05831.t1 | gi|390362803|ref|XP_001186261.2| | 1.0e-20 | |
| pfu_aug2.0_3441.1_05831.t1 | gi|390348066|ref|XP_003726926.1| | 3.0e-20 | |
| pfu_aug2.0_3441.1_05831.t1 | gi|390333799|ref|XP_003723779.1| | 5.0e-18 | |
| pfu_aug2.0_3441.1_05831.t1 | gi|390364394|ref|XP_003730601.1| | 4.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_3441.1_05831.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3441.1_05831.t1 atggcagccgacaagaagagatttgctgacctcacagataatgatattggcaaaattattgaggaaaaggacgctgcgaa cactaaaaggtccattgaaaattctgttcggttgttccgtaaataccttctagagacaggaaagggggctgatttcgaaa atggagacgatttatgcccagttcgcaccttcgtacgtcacaagcgaaagctcaatccgaagtgtgtctttctgttccag agaccgtcatcaaatccaaaggctgatgtgtggtacgataactgcccagttggtgataaaaagttagcagcaattatgtc aactataagtgctgaatttggtctctctaaatcttatactaaccattcacttcgagcaactttagtgcatattctggatg cggcaaattttgctggacgacatatcatgtgtgtcacaggacacaaaagcgagactagtttaaaaacctatacaggttac acagatgcagtgctactgcaagcaacacagattaacttcccgtccgatagtgattttggacttgaaccgttgtcagatag tcagatcaatcagcttctgtgcgatatgtctgatgatccgtgtacaggtcctcaacccattgctgccaaggaaaacgtga agccaaatacaacaaatcaaatgcctgtgcaattccaaagtcaagtgcagacatttcaaaatgtcagttataatttaggc tattcaccgatgccgagtattacaaaccatggaaccatcaatatcaacgtttatcaggtttccaagaaataa |
|
Protein
| Protein ID | pfu_aug2.0_3441.1_05831.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3441.1_05831.t1 MAADKKRFADLTDNDIGKIIEEKDAANTKRSIENSVRLFRKYLLETGKGADFENGDDLCPVRTFVRHKRKLNPKCVFLFQ RPSSNPKADVWYDNCPVGDKKLAAIMSTISAEFGLSKSYTNHSLRATLVHILDAANFAGRHIMCVTGHKSETSLKTYTGY TDAVLLQATQINFPSDSDFGLEPLSDSQINQLLCDMSDDPCTGPQPIAAKENVKPNTTNQMPVQFQSQVQTFQNVSYNLG YSPMPSITNHGTININVYQVSKK |
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