Gene
| Gene Model ID | pfu_aug2.0_3454.1_15794 |
|---|---|
| Locus | scaffold3454.1 : 26496 ... 34031 : + |
| To GenomeBrowser | scaffold3454.1:26496..34031 |
| Genes list of scaffold | scaffold3454.1 |
| Synonym | pfu_aug1.0_9627.1_09982 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3454.1_15794.t1 | 4 | 1 | zf-C2H2 | 6 | 29 | 2.5e-08 | 33.7 | 3.4e-08 | 8.4e-05 | 22.6 |
| pfu_aug2.0_3454.1_15794.t1 | 5 | 1 | zf-C2H2_4 | 6 | 29 | 6.0e-08 | 32.4 | 1.5e-07 | 0.00037 | 20.6 |
| pfu_aug2.0_3454.1_15794.t1 | 4 | 2 | zf-C2H2 | 35 | 56 | 2.5e-08 | 33.7 | 9.3e-06 | 0.023 | 15.0 |
| pfu_aug2.0_3454.1_15794.t1 | 5 | 2 | zf-C2H2_4 | 35 | 57 | 6.0e-08 | 32.4 | 5.6e-07 | 0.0014 | 18.8 |
| pfu_aug2.0_3454.1_15794.t1 | 4 | 3 | zf-C2H2 | 373 | 392 | 2.5e-08 | 33.7 | 0.00036 | 0.9 | 10.0 |
| pfu_aug2.0_3454.1_15794.t1 | 5 | 3 | zf-C2H2_4 | 373 | 392 | 6.0e-08 | 32.4 | 0.0017 | 4.3 | 7.9 |
| pfu_aug2.0_3454.1_15794.t1 | 4 | 4 | zf-C2H2 | 526 | 531 | 2.5e-08 | 33.7 | 1.6 | 4000.0 | -1.5 |
| pfu_aug2.0_3454.1_15794.t1 | 5 | 4 | zf-C2H2_4 | 526 | 532 | 6.0e-08 | 32.4 | 1.4 | 3600.0 | -1.3 |
| pfu_aug2.0_3454.1_15794.t1 | 5 | 5 | zf-C2H2_4 | 917 | 937 | 6.0e-08 | 32.4 | 3.6 | 9000.0 | -2.5 |
Transcript
| Transcript ID | pfu_aug2.0_3454.1_15794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3454.1_15794.t1 atggcacctttaaaatttgaatgtgtactttgcggaaaatcctttactcgtcgctcagcactagatcgtcatagtcggac ggttcatggcggggagtccatcaaatgtgaattttgtggacataatttcagtcgaaaagacagttatcttcgacatgtaa agacacatcatgtcagtagacacgatgaagaagacattcaaaccttgcagcaaggtgggggtaagctcgatgacgcaaca gcagacaaagcagagccccgagtcaatgaacctcttgataatgatcaaacatgtttttctgaggaagaggcaatcaatgg gaatctcaacaaatttaccatgaaagctgacgatcagacaaaatatgatcctcttacatttctgaagtcaaaagaggact ctattagatcgctccttaaaaaagctgtcttgaaaagacggggtatcaaggtatacattaccatgctagtgcgattctcc aaacagagaggggaccaagtggagacaaccgatccctattttcatggacggtgtcacatcatcttaaaacttgatgatat cgatatggcaataaaggaaagcatgaagaaaatcatgacatcttttatcgagtaccagagagaggggagcaactggacat tagacaaagtacttcagattgatattaacatagccaactacagaccaatcaagggatcaagctttataccccttccagca aagttagcagcaaagaaagctattgtcaatgttcagaataccgacgataaatgtttcatgtggtccgttctagcagctct ccatcctcttcagggacatcatgctaattcgaacagagtgtccaactacgtgaaatatatagatgaattcgactttacag ggatcaacttccctgtcaaagtatcagatattcctagattcgaaattaggaatgacatctccatcaacgtctttggttat gaaaaaggagatatataccccctccatctgaccaatgaaaggggactccaacatgtcaatctattgctgatatcagataa agagaaacaacactattgttggattaagaacttcaaccgtctcctaggtgatcaaaatgacgacaacaatcaatatcatt attgtcattattgcctacatggattcactaagaagtctctcctcaaaaagcacattccctactgtaaagtgcatggagca cagcgtacagaaatgccacgagaagaagataaatggttgcgattcacggatgtttcaaaacgactgaaagtcccctttgt cgtgtatgcagactttgagtgtattttagagaagatacatggttgccaacccgatccatcaaaatcatcaaccattaaac tagcaaagcacaaaccatctggatttacctataaagttgtaggtcttaacgaagatcttacagaggatcacgtgacgtat agaggtccaaatgcggcagacgtctttatagatcacatggtcgaattagaggagcgcttgatacacgttgtccgaaattc taaaccaatggagttgacagacgacgattttgaatctttccaaaaagcaacgcactgcagcatttgtggaagagaacttg atggtgaagtggcacgtgatcattgtcacgtgactggtaaattcagaggggctgcacacatgtcgtgtaatcttaattat aaattaagagagcgaatcccagtattttttcacaatcttcggggatatgatgcccatctcatcatggaatccattggcaa agtcaaaaaccgacggttgaactgtattccacagaaccacgaaaaatacatctccttctcccttggaagaatggagttta tcgacaccttccagtttctatccactggtcttcagaaattggtagaaaatctatcggaggaagatgcatccaaattcagc catctacaaagttacatacaaaaaagccatccaaaaaatgcaaagatcaaaacggaattattgagtcggaaaggagtgta cccttaccgctacatgagcacctttagtagatttaacgaaacaaatctacctcccaaagaagccttctacaacgacctta ctgaaagtcatatctcagaggaggattacttccatgcccaattagtatgggatgttctcaacatcaagaacctcggggag tatcatgatctctacatggagacggatgttcacctcctggcagacgtgtttgagaacttcagaactctttgtttgaacaa atatgaattagacccagctcacttttacacgtcacccggtttggcgtggcaggcagctctcaagatgacaggtgttgacc tggaattgttcacagatcctgacatgcacttattcatagaaaaaggtttaaggggtggtgtagccatgattacaaagaga tatgccaaagctaatatctccctactcaaggaatatgatgccaataaagacatcagtagtttgatctacctggacgctaa taacctatatggatgggggatgagtcaacctttgcctacccatgattttgattggctcaacgaaggagaaattgcaacac tcgatgtaacatctctacctcctactggagacaatggatatattttagaggtggatttagagtatccaaaagatcttcat gatcatcacaatgattatcctttggcaccagaatctttggaaatcaggcgggaaatgctgtcaccgtaccaaacaaggct tctcaaagatcttggcatgaaagcaactaaatgttccaaactggtaccgaatctacgcgacaaagaaaagtacgtcttac attatcgaaatttacaactctacctatcactcggcatgaaattaaagaaaattcaccgggtgttgagattccaacagagt ccctggttgaaaccctacatcgacttcaataccaacatgcggaaagaagccaaaaatgaatttgaaaaggacttttataa gctcatgaataactccgtatttggcaaaacgatggagaatttgagaaaacgtgtcgacattcagctacagaaatatggga acactgcacaactgctattcactgacacagattcattatgttacgacatcaaaaccgatgatatcttcaatgacatggcg caagataaacatctgtttgacttcagcgggtataaaaaggaccaccccctttacgataccaccaacaaaaaggtaatagg caaaatgaaggacgagttaaacggtgctttcctaaaggaatttgtaggattaagagccaaaatgtatagcatcctatacg aaagagaaaaaactgataaagaaatcgaaaagttaaaagaaatgcaaaaatcccaggatgcaaaagaaatagttctagag gaaaagaaaagaaccaaagaagacgaaaaggtcgaagagttgaatcaaagtggaaaatcccaggatgaaaaggaaaaagt catagaggagaaaaatagagccaaaggggtcgtaaaagccgtcatcgagtctaaattacgacacgatttgtatactcgat gcctttttaaaaaagaatcacaaatggaatccatgaatcttttccggacagaaaagcatcaaatacatacggtgaaaatc aacaagacgaccctgtcagctttcgatgacaaacgatacatattagcagatggaatacatactctagcatatggacattg gaggacaacttaa |
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Protein
| Protein ID | pfu_aug2.0_3454.1_15794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3454.1_15794.t1 MAPLKFECVLCGKSFTRRSALDRHSRTVHGGESIKCEFCGHNFSRKDSYLRHVKTHHVSRHDEEDIQTLQQGGGKLDDAT ADKAEPRVNEPLDNDQTCFSEEEAINGNLNKFTMKADDQTKYDPLTFLKSKEDSIRSLLKKAVLKRRGIKVYITMLVRFS KQRGDQVETTDPYFHGRCHIILKLDDIDMAIKESMKKIMTSFIEYQREGSNWTLDKVLQIDINIANYRPIKGSSFIPLPA KLAAKKAIVNVQNTDDKCFMWSVLAALHPLQGHHANSNRVSNYVKYIDEFDFTGINFPVKVSDIPRFEIRNDISINVFGY EKGDIYPLHLTNERGLQHVNLLLISDKEKQHYCWIKNFNRLLGDQNDDNNQYHYCHYCLHGFTKKSLLKKHIPYCKVHGA QRTEMPREEDKWLRFTDVSKRLKVPFVVYADFECILEKIHGCQPDPSKSSTIKLAKHKPSGFTYKVVGLNEDLTEDHVTY RGPNAADVFIDHMVELEERLIHVVRNSKPMELTDDDFESFQKATHCSICGRELDGEVARDHCHVTGKFRGAAHMSCNLNY KLRERIPVFFHNLRGYDAHLIMESIGKVKNRRLNCIPQNHEKYISFSLGRMEFIDTFQFLSTGLQKLVENLSEEDASKFS HLQSYIQKSHPKNAKIKTELLSRKGVYPYRYMSTFSRFNETNLPPKEAFYNDLTESHISEEDYFHAQLVWDVLNIKNLGE YHDLYMETDVHLLADVFENFRTLCLNKYELDPAHFYTSPGLAWQAALKMTGVDLELFTDPDMHLFIEKGLRGGVAMITKR YAKANISLLKEYDANKDISSLIYLDANNLYGWGMSQPLPTHDFDWLNEGEIATLDVTSLPPTGDNGYILEVDLEYPKDLH DHHNDYPLAPESLEIRREMLSPYQTRLLKDLGMKATKCSKLVPNLRDKEKYVLHYRNLQLYLSLGMKLKKIHRVLRFQQS PWLKPYIDFNTNMRKEAKNEFEKDFYKLMNNSVFGKTMENLRKRVDIQLQKYGNTAQLLFTDTDSLCYDIKTDDIFNDMA QDKHLFDFSGYKKDHPLYDTTNKKVIGKMKDELNGAFLKEFVGLRAKMYSILYEREKTDKEIEKLKEMQKSQDAKEIVLE EKKRTKEDEKVEELNQSGKSQDEKEKVIEEKNRAKGVVKAVIESKLRHDLYTRCLFKKESQMESMNLFRTEKHQIHTVKI NKTTLSAFDDKRYILADGIHTLAYGHWRTT |
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