Gene
| Gene Model ID | pfu_aug2.0_3458.1_29106 |
|---|---|
| Locus | scaffold3458.1 : 4 ... 2170 : + |
| To GenomeBrowser | scaffold3458.1:4..2170 |
| Genes list of scaffold | scaffold3458.1 |
| Synonym | pfu_aug1.0_21712.1_25961 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3458.1_29106.t1 | 4 | 1 | NHL | 302 | 321 | 7.3e-07 | 28.8 | 0.0002 | 0.61 | 10.1 |
| pfu_aug2.0_3458.1_29106.t1 | 4 | 2 | NHL | 393 | 414 | 7.3e-07 | 28.8 | 0.045 | 130.0 | 2.7 |
| pfu_aug2.0_3458.1_29106.t1 | 4 | 3 | NHL | 442 | 457 | 7.3e-07 | 28.8 | 0.0012 | 3.4 | 7.7 |
| pfu_aug2.0_3458.1_29106.t1 | 4 | 4 | NHL | 483 | 498 | 7.3e-07 | 28.8 | 0.003 | 8.9 | 6.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3458.1_29106.t1 | gi|260785262|ref|XP_002587681.1| | hypothetical protein BRAFLDRAFT_92727 [Branchiostoma floridae] | 6.0e-07 |
| pfu_aug2.0_3458.1_29106.t1 | gi|260823278|ref|XP_002604110.1| | hypothetical protein BRAFLDRAFT_71602 [Branchiostoma floridae] | 6.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_3458.1_29106.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3458.1_29106.t1 atggaatcgagacagaaaactagcatcggctttgacactccattgccagacgagtcccttcttctaaggagaacatggac gcgtttcccgcaagaaaaaggactttgctttgaatgcaaaatgcaatttatggctatgtcgtgttacgacgatgggaaac attattactgtcctgtatgtagcaacatgctggactttgaagtagagctgccaaagaagtccgacgtaaattctgaagta gagctgctaaagaagtccgacgtaagttctgaagtagaactgccaaagaagtccgacgaaagtcctgcaagtgctgccat tgaaaatacttgtgataaaagtgatttagaatcgaaagatgctgatggaggaaaaggtattgacagctcccttataaaca acgatgaagctggttcgattgtagaaagtgttgtcagtcagggaaaagatgatggtgtgaggagagaagaaaacgtttct gaatcgaatgaaaacagtaacaatattgacagtccgcccgaggtaaaacctttaccacagaaaaatgtgaatagatcttt gttacgaggtaagacagaaattgatagacggaagtttgatgacagtaagacgatgagaaaatttgacagatccaatacaa tggttgcaggtggttcaaagccaaactcaaagaaaacattaaacaagactgtttcttctccgtttttgaaagtacacatg tccgaactgaaaatgattttgcggaaagaatttctttgcagacgacacaaaggatgtgtgaattctataacaccagtgac gactgaaaaagcatggatggttatccaaaattctgctgttgctctctacaacagaaatggaaatttactgcaaagcataa caaaacacagacgaactgtaacggatgcttgtattgatgaaaatggcaatatatatctggcatgttttaatgacaaatgc atcatgcgaatctcaaagactggaggtttatccaagtttactggcacttacggaatttttcctgcagaactagcattgac gacgcaaagagagttggtggtcgtaggtgttggtaggaaagatgcagtgacgtatgatgaagataaagaatatggcgtgc tgatatttgggtctgatggtcaactcatcacaaaaattacagcattatctgaaccttttcgataccccatttacgtcgac gttagcgtccatggtgaaatagcagtgggggattatatcaacaaagaagtggtccttcttacaatctcaggatctgagtt acttcgtttcaatggttctgaaatatttgctcattcttttgttccaaagggcctctgctttgacagattaggaaatgtta ttgttgccaactgggatggagcactatgcattcttgaaagagacaaacagtttgcacctcgtggacttctactttcagat ggttttgagcctttgagtattgctgtcgacgagaaaaacgatttgtggattggtggtagaaatggtgctgttgtccgcgt gtatagctttgaataa |
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Protein
| Protein ID | pfu_aug2.0_3458.1_29106.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3458.1_29106.t1 MESRQKTSIGFDTPLPDESLLLRRTWTRFPQEKGLCFECKMQFMAMSCYDDGKHYYCPVCSNMLDFEVELPKKSDVNSEV ELLKKSDVSSEVELPKKSDESPASAAIENTCDKSDLESKDADGGKGIDSSLINNDEAGSIVESVVSQGKDDGVRREENVS ESNENSNNIDSPPEVKPLPQKNVNRSLLRGKTEIDRRKFDDSKTMRKFDRSNTMVAGGSKPNSKKTLNKTVSSPFLKVHM SELKMILRKEFLCRRHKGCVNSITPVTTEKAWMVIQNSAVALYNRNGNLLQSITKHRRTVTDACIDENGNIYLACFNDKC IMRISKTGGLSKFTGTYGIFPAELALTTQRELVVVGVGRKDAVTYDEDKEYGVLIFGSDGQLITKITALSEPFRYPIYVD VSVHGEIAVGDYINKEVVLLTISGSELLRFNGSEIFAHSFVPKGLCFDRLGNVIVANWDGALCILERDKQFAPRGLLLSD GFEPLSIAVDEKNDLWIGGRNGAVVRVYSFE |
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