Gene
| Gene Model ID | pfu_aug2.0_348.1_27258 |
|---|---|
| Locus | scaffold348.1 : 21126 ... 28290 : + |
| To GenomeBrowser | scaffold348.1:21126..28290 |
| Genes list of scaffold | scaffold348.1 |
| Synonym | pfu_aug1.0_5561.1_59806 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_348.1_27258.t1 | 1 | 1 | SBP_bac_3 | 70 | 227 | 3.0e-06 | 26.6 | 1.2e-09 | 1.8e-05 | 24.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_348.1_27258.t1 | gi|390353059|ref|XP_001192880.2| | PREDICTED: uncharacterized protein LOC755972 [Strongylocentrotus purpuratus] | 4.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_348.1_27258.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_348.1_27258.t1 atgcacgcacttatcccgaatagaccgctttggagcgttagcggtcaactcactctgagatgttggcgtgagggggtcca aggagaaggagaaaaccggagtacccgtagaaaaaacccctgcagaggcctgggcggggaccacctaccctcccacataa gaaccttcgccgaatctgggattcgcatccggggcgttagaggcgaaagagatacagacggctacctaaagggtgcagac gtagatatgatcggcgaggtttgcaagattgctggagagaaatgtgaaatccttattcagccatttgaagaatgcgttag aacttacaacggcaaattctatcctggtagaggtctgatggcaggatggtttgacgcatgtgtgaattttgtcagctcag tggatagagtaaattcattaagtttcacaaataagatccgagaagcttattcaaagtttgccgtgtataaaggtaaccca aaaggcttcgatcctaacaacatatcagagtctacaatagtccatctaaatggtgcatatgcaaacgagcagtgtatggt tagaataggattgggcagaccgaagagaatcattgtggctgctacaatagacgaagctaaagccctgatgctcaaccaaa cgggagacgccttattttcacaaagaagcagttttaacgagttagacgtcataccaacagatttccattgtgatattaac ggttcgtcaatgatggtaaagaaaggtagtacacttccagcctggtggaatccagcttttgacaagtattacaaatcggg agcatatagtacaaactgcgaaggtgccaacaaaaaatatggagggtttccagtgttacacagctgtttacccagaccct ctgcagtaccaggagccggagcattgggtaaaagatag |
|
Protein
| Protein ID | pfu_aug2.0_348.1_27258.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_348.1_27258.t1 MHALIPNRPLWSVSGQLTLRCWREGVQGEGENRSTRRKNPCRGLGGDHLPSHIRTFAESGIRIRGVRGERDTDGYLKGAD VDMIGEVCKIAGEKCEILIQPFEECVRTYNGKFYPGRGLMAGWFDACVNFVSSVDRVNSLSFTNKIREAYSKFAVYKGNP KGFDPNNISESTIVHLNGAYANEQCMVRIGLGRPKRIIVAATIDEAKALMLNQTGDALFSQRSSFNELDVIPTDFHCDIN GSSMMVKKGSTLPAWWNPAFDKYYKSGAYSTNCEGANKKYGGFPVLHSCLPRPSAVPGAGALGKR |
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