Gene
| Gene Model ID | pfu_aug2.0_348.1_27260 |
|---|---|
| Locus | scaffold348.1 : 34029 ... 51115 : - |
| To GenomeBrowser | scaffold348.1:34029..51115 |
| Genes list of scaffold | scaffold348.1 |
| Synonym | pfu_aug1.0_15919.1_03656 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_348.1_27260.t1 | 4 | 1 | PHD | 77 | 124 | 3.3e-26 | 90.7 | 2.8e-16 | 1.0e-12 | 47.4 |
| pfu_aug2.0_348.1_27260.t1 | 1 | 1 | JmjC | 251 | 367 | 1.59748e-43 | 147.5 | 0.0 | 4.90454e-43 | 145.9 |
| pfu_aug2.0_348.1_27260.t1 | 2 | 1 | zf-C5HC2 | 378 | 397 | 3.7e-21 | 74.9 | 0.045 | 170.0 | 2.4 |
| pfu_aug2.0_348.1_27260.t1 | 4 | 2 | PHD | 457 | 462 | 3.3e-26 | 90.7 | 4.0 | 15000.0 | -7.0 |
| pfu_aug2.0_348.1_27260.t1 | 2 | 2 | zf-C5HC2 | 457 | 510 | 3.7e-21 | 74.9 | 9.9e-25 | 3.7e-21 | 74.9 |
| pfu_aug2.0_348.1_27260.t1 | 3 | 1 | PLU-1 | 521 | 853 | 0.0 | 327.1 | 0.0 | 0.0 | 313.6 |
| pfu_aug2.0_348.1_27260.t1 | 4 | 3 | PHD | 930 | 985 | 3.3e-26 | 90.7 | 3.6e-13 | 1.3e-09 | 37.5 |
| pfu_aug2.0_348.1_27260.t1 | 3 | 2 | PLU-1 | 989 | 1041 | 0.0 | 327.1 | 2.0e-07 | 0.00073 | 18.5 |
| pfu_aug2.0_348.1_27260.t1 | 3 | 3 | PLU-1 | 1188 | 1219 | 0.0 | 327.1 | 0.08 | 300.0 | 0.0 |
| pfu_aug2.0_348.1_27260.t1 | 4 | 4 | PHD | 1395 | 1441 | 3.3e-26 | 90.7 | 1.0e-10 | 3.8e-07 | 29.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_348.1_27260.t1 | gi|597059670|gb|AHN05303.1| | 0.0 | |
| pfu_aug2.0_348.1_27260.t1 | gi|524870453|ref|XP_005092011.1| | PREDICTED: lysine-specific demethylase 5A-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_348.1_27260.t1 | gi|524870451|ref|XP_005092010.1| | PREDICTED: lysine-specific demethylase 5A-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_348.1_27260.t1 | gi|585658270|ref|XP_006815984.1| | PREDICTED: LOW QUALITY PROTEIN: lysine-specific demethylase 5A [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_348.1_27260.t1 | gi|695143360|ref|XP_009498961.1| | PREDICTED: lysine-specific demethylase 5A [Phalacrocorax carbo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_348.1_27260.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_348.1_27260.t1 atgcacacaagtaattgttatgtcttttctttgcagtccaagcttgacatagattacaatgtgaattcagagctgaagaa gctacagttctttggagctggaccgaaagctgcagtgccacctgttggagaggttaaagaagagaaacctgaagaaaaac caacaaagggagtgaacactcgtcacaaaaaccctggtcctggcgcttataccaccgtggatttgtacatctgccatatg tgtaaccgtggtgatggagatgagtatatgttgctatgcgatggttgcgatgatgctttccacacatactgtttgattcc tcccttaccagaggtacctaagggcgattggagatgtccgaaatgtgtagctcaggcatgtaacaagccataccatcctt acggatttgaacaagctaaaaaggagtactctctgcagacatttggagaaatggctgatcagttcaagtccaactatttc aacatgcctgtccatatggttccctgtgagagtgtggagaaggagttttggagacttgttcactgtatagaggaggatgt gaccgtggagtacggagccgatatccacgcggcagagatgggaagtggattccccaccaaagacacgaaagatcttactc ctgaggatgaggagtacatgaactcgggatggaacttgaacaatttaccaatattagaacagtcagtcttatgtcacatc aatggggacatttcaggcatgaagattccttggtgttatgtaggaatgtgcttctctagtttctgctggcataatgaaga tcactggagttactccattaactacatgcactggggtgaacctaagacttggtacggtgtaccaggagagaaggccgatc tgtttgaggaggttatgaagaagacggcaccagagttgtttgaacagagtcctgatttactacatcagctgaccaccatt atgaaccctaacatactcatggagcatggagtacctattgttcgtacaaaccaacacgctggagaatttatcattacatt cccccgtgcctaccatgcaggatttaaccagggatataactttgctgaagctgttaactttgctcctgctgactggctcc cgattggtcgtgcctgtattgagcattacagatctttgtgtcgacagtgtgtcttttctcatgaggagttgatctgtaag atggctgccgacccagatagcttagatcttaaaatagctgccagtacccacaaagatctactagctattgttgaaagaga gaagagactgcgtaaaacactcttagacaaaggaacaactgaggcagagagagaagcatttgagctgctacctgatgatg agagacagtgtgacttctgtaaaaccacctgcttcctgtctgctatcacctgctcctgtaaaccaaacaaggtagtatgc ctggatcacgtggagaaattgtgtaactgtcagccgtctgagcattgtctacgatacaggtatacccttgatgagttacc cacaatgctgcaccgtcttaaggtacgggcggagtcttatgataactggaacaacaaagtacgggctgcactggaggcag tgggtgatgagaaactagacatacaagatttgaaggagtacatcagtgaggcagaggagaagagattcccagactcggac cttctacagaaattgtcaaacgctgtgaatgaagccgagaaatgtgctagtgtagcggctcaactcgtgtcaaagaaagt tagaacaagaaatagacataatgaaggaaaatacattgccaaacttagcctggaagaattaaactgtttctatgaacaag taacagaactctcctgtgtcattaaggaggcaaagcttctcaaggatttgttagatagtgtgacacagtatcagaaggaa tctcaggaggccctggatgccgagacacctgactcggaaaaactcgaaaaactcatcgagtttagtgccacactggatgt agatctacctgaaatacccaggctcaaacaggtattacagcaggccaaatggttagatgaggtcaggaactctctcctgg aaccggacaatgttacactagatgtcatgcgtaagatgatggagtcgggcgtcggcttggctccccacccagccgtggag aaagctatggcagagctgcaggaactccttatggtcagtgaaagatgggaggagaaagcaaggatttgtctgcaagcaag accaagacatgtgatggctacactagaggcaataatcaatgaagctaaaggaatccctgcctacttacctaatgttagtg ctctgaaagaagccctgaagaaagccaaggaatggacacagaaagttgacgcagtacagaattctgactcttacccatac ttggatgtattggaagcccttgtcaacaaggggagaccaatccctgtcagactggatcaacttcctcaggttgagtccca ggtagctgctgccaagtcctggagagagaggactgcgcggacattcctcaagaaaaactctacttactccctgttagagg tgctgtcaccacggtctgacataggcacatatagcagtggtaagaagcagaagaagaaagtaaaagaggaaaatagagac agaagggacagtgagaataataacaaccaaccagattataaagtagaggaacaaagagatcctgctgccattcaggaagt ggaaagaatgagagaattgagggagaggaacatggagaagatgaaccaaccagaaacagaagctaaatattgtgtgtgtc gtaaagaggggacaggattcatgctccagtgtgaattatgtagagactggttccatggaacatgtgtgccattaccaaag tcagcaaacattaagaacaaaacctctgctgtgcaagcagcgaaggacctgaaattcctgtgtccattatgtctaagatc tcggcggccaaggttagaaacaatcctatccctacttgtgtcattacaaaaactccctgttcgattgccagaaggagaag ctctgcagtgtcttactgagagagccatggcatggcaagacagagccagacaagctctgacgacaagtgaactagcctca gcacttgccaaactcagtgtcctcagtcagaaaatggtggaacaagctgctagggagaaaacggagaaaataatcaatgc tgaattaatgaaagcagcaaataatcctgatctacagggacaattagctagcgttactcagagtgcgtttggtggaacaa gtggtagaattactaatggtcgtcacatggactccgggaattacagtatggattctgacaattccctgttgatgccactc tccccacaggattccccgcctccacaaagtggtgatgattaccagatggaggtagaagtggtcagctctaaccataccgg tatggaacacgcctattcctcagcatcaaagtcaaatacagtatcaccaaagaaacatcagcgtaaaacccctcttatgg ccagatcagctgaggctccagtgcttgagttatctccaatggctaaggcccagctggaggaactgatgatggagggagac ctgctcgaggtatccctagacgagacacagcatatctggaggattctacaggcgtgtcagcctcagggagatgccagtaa atacctggatatggaggagacagttttgtctggtgatggcagtgataaagaaaaagttctgttcaagatcaaaaaggaga agttgaaagatcccgagcgtaagaagaagaaacggaagttggacaaagacggaaaagaaataatcaaaccaaagaaaact aaggatggagtggaggccaaggacaaaataaagatcaaattgaaaaaggagacagatccaaacaaggaaaagaaattgat gaaggatttggacaatcaggaaatagctttgtcaggatctgcagcttccgacttagatagaatccgagctctaatagagt taagtcctgacaaaatgaagaaactagacaaacccaagaaaaagaagacaaaagtcaagaaggaaggaggagaggaagga gagaagaaaaaacgaaaacctcgtaaaaagaaggagaaggaatgcttgataatggtagatgaagacgatgataataatga tgaggactgtgcagcaattaaatgtctgagaccaacaggtgaggaggtgaactgggtgcagtgtgaccgctgtgaagagt ggtatcacctgttatgtgtgggactcagctctgaagaaattacggaagatgaagaatatgagtgctttaaatgtaaaaac aaaaatatttcctctccgtttctatctcctgggatcacaagtacagatagccattcttccctaacccctaacacctctaa cattgatgttactgacactgaacaaccgtttattcctccagcagctagagtgccatcaaactttgacaatgacggagaag ttgacatggaatcatttgaatctcctattattaaaagtgccgataatttatccgtggattcactgagaagtagtgctgac agttccgatttcttgacatcagcagttaccaccatgcaaacatccatcagtaaaatccccgagactttaccgagtgacgt catgcacaatgatagcggggaatcgcaggaaagtgtttcacaagatttaataacgactgaatctgcatgtgagcaaagta ttgttacagacaaagttacaacaacagaagtgcaaagtctaaatgatgggatgtcacagcccaatttagttactcaggac tccggtgtggccgatttagagcaagttgttgaaatggaaattgaaaacaattatggaacagaagtagaaccggaacaaaa cacagaaactgaagtagaatctgtcctccctgaagtgtcgacagaggacgctagtaaaaccatatctgtgataccctcac ctgtaacaaatctctccgatcatcagacagaagacacatcaacagaaaaaagtcaagatttattggatgaaataacttca tag |
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Protein
| Protein ID | pfu_aug2.0_348.1_27260.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_348.1_27260.t1 MHTSNCYVFSLQSKLDIDYNVNSELKKLQFFGAGPKAAVPPVGEVKEEKPEEKPTKGVNTRHKNPGPGAYTTVDLYICHM CNRGDGDEYMLLCDGCDDAFHTYCLIPPLPEVPKGDWRCPKCVAQACNKPYHPYGFEQAKKEYSLQTFGEMADQFKSNYF NMPVHMVPCESVEKEFWRLVHCIEEDVTVEYGADIHAAEMGSGFPTKDTKDLTPEDEEYMNSGWNLNNLPILEQSVLCHI NGDISGMKIPWCYVGMCFSSFCWHNEDHWSYSINYMHWGEPKTWYGVPGEKADLFEEVMKKTAPELFEQSPDLLHQLTTI MNPNILMEHGVPIVRTNQHAGEFIITFPRAYHAGFNQGYNFAEAVNFAPADWLPIGRACIEHYRSLCRQCVFSHEELICK MAADPDSLDLKIAASTHKDLLAIVEREKRLRKTLLDKGTTEAEREAFELLPDDERQCDFCKTTCFLSAITCSCKPNKVVC LDHVEKLCNCQPSEHCLRYRYTLDELPTMLHRLKVRAESYDNWNNKVRAALEAVGDEKLDIQDLKEYISEAEEKRFPDSD LLQKLSNAVNEAEKCASVAAQLVSKKVRTRNRHNEGKYIAKLSLEELNCFYEQVTELSCVIKEAKLLKDLLDSVTQYQKE SQEALDAETPDSEKLEKLIEFSATLDVDLPEIPRLKQVLQQAKWLDEVRNSLLEPDNVTLDVMRKMMESGVGLAPHPAVE KAMAELQELLMVSERWEEKARICLQARPRHVMATLEAIINEAKGIPAYLPNVSALKEALKKAKEWTQKVDAVQNSDSYPY LDVLEALVNKGRPIPVRLDQLPQVESQVAAAKSWRERTARTFLKKNSTYSLLEVLSPRSDIGTYSSGKKQKKKVKEENRD RRDSENNNNQPDYKVEEQRDPAAIQEVERMRELRERNMEKMNQPETEAKYCVCRKEGTGFMLQCELCRDWFHGTCVPLPK SANIKNKTSAVQAAKDLKFLCPLCLRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMAWQDRARQALTTSELAS ALAKLSVLSQKMVEQAAREKTEKIINAELMKAANNPDLQGQLASVTQSAFGGTSGRITNGRHMDSGNYSMDSDNSLLMPL SPQDSPPPQSGDDYQMEVEVVSSNHTGMEHAYSSASKSNTVSPKKHQRKTPLMARSAEAPVLELSPMAKAQLEELMMEGD LLEVSLDETQHIWRILQACQPQGDASKYLDMEETVLSGDGSDKEKVLFKIKKEKLKDPERKKKKRKLDKDGKEIIKPKKT KDGVEAKDKIKIKLKKETDPNKEKKLMKDLDNQEIALSGSAASDLDRIRALIELSPDKMKKLDKPKKKKTKVKKEGGEEG EKKKRKPRKKKEKECLIMVDEDDDNNDEDCAAIKCLRPTGEEVNWVQCDRCEEWYHLLCVGLSSEEITEDEEYECFKCKN KNISSPFLSPGITSTDSHSSLTPNTSNIDVTDTEQPFIPPAARVPSNFDNDGEVDMESFESPIIKSADNLSVDSLRSSAD SSDFLTSAVTTMQTSISKIPETLPSDVMHNDSGESQESVSQDLITTESACEQSIVTDKVTTTEVQSLNDGMSQPNLVTQD SGVADLEQVVEMEIENNYGTEVEPEQNTETEVESVLPEVSTEDASKTISVIPSPVTNLSDHQTEDTSTEKSQDLLDEITS |
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