Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_348.1_27262
Locus scaffold348.1 : 57616 ... 69781 : +
To GenomeBrowser scaffold348.1:57616..69781
Genes list of scaffold scaffold348.1
Synonym pfu_aug1.0_54435.1_27350

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_348.1_27262.t1 gi|676426758|ref|XP_009044726.1| hypothetical protein LOTGIDRAFT_198558 [Lottia gigantea] 0.0
pfu_aug2.0_348.1_27262.t1 gi|296434279|ref|NP_001171806.1| coiled-coil domain containing 77-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_348.1_27262.t1 gi|156366135|ref|XP_001626996.1| predicted protein [Nematostella vectensis] 0.0
pfu_aug2.0_348.1_27262.t1 gi|723535978|ref|XP_010298378.1| PREDICTED: coiled-coil domain-containing protein 77 [Balearica regulorum gibbericeps] 0.0
pfu_aug2.0_348.1_27262.t1 gi|705656884|ref|XP_010123981.1| PREDICTED: coiled-coil domain-containing protein 77, partial [Chlamydotis macqueenii] 0.0

Transcript
Transcript IDpfu_aug2.0_348.1_27262.t1
Definition-
>pfu_aug2.0_348.1_27262.t1
atggggactaggaacgacgacggctcaaataaagggaaaaatgtgagcatggacaaaggaccagagaaggtagcaccacc
gaagtccatctccacgactgctaataaactgatgacatcattgatggacacatctggagaggtagatgatagctttaagg
atttccgcagtaggaaagatgacaagttaccaaatgtaaatgaaagactcggtcatctgaggccatccagagaactgtta
gaatactacaggaaaaagatagcagaatatgatgaggaacatgatcatatggtcagcaaactggaagattacagatgtac
ttatgaggaacagcataagttacaatgggagttaaggcagcgtgaggaggagatagtagaattacagaaggcgttaagtg
acatgcaagtctacttgtttcaagaaagggaacatgtgttgagattgtattcagaaaatgatcgactaaagatcagagaa
ttggaagacaagaagaaaattcagcagttacttagcctaagtggaactgctgagagtgagattacatacttcatgaagga
accacccgctaaagctgtagtagaacagaaaacaaagaataaacgaccagctagtgcctcagatgttaaacatcacaaag
gagttaagaaaaaacaagttccagtagcagaaagaagaggctctatagaagcaattccagaggagaagtacaaacatgac
aacgaggtgctagcgttacaggtggaggcgttacaggcccagctacaggaacagaccaagctagccaaggaacaaaattt
ttctactctcattaacttgtatttgtctttaaacatgaagttaagatatgtgacttatatggagaataatatttttccta
ttagactacacaaaactcaggatttactgtatgaaagtaccaaggactttctggagctaaggtaccaaggtcgttctaca
gagagagtgtttatggcggaaaaagacaaacttctcagggatctagatcagatgaaagtcaagctccatccagagcgtga
ttctgtgctggacatgtccgatggtactggtcccgcccaccagaaggaggaaatgaagtccctggagtaccagttacagc
agtctcagaagttggcagagatgtacagagaacaagtcatacagctagaagatgaactgtcacgtatacgggaagagggt
gatgtcactagggaaattttcaaggatcgtagtgataagatgacaaaaaggcttcagttgatgaatcagagataccaaga
tctagagaggagacgtaacttagaagtggaaggcttcaaaaatgatattaagaatctcaggtctcgattaaaagatgtcg
agaggcagctgtataaggttacaatgggttttgccgaggaaattgatgttaaacgtccagaagatctagatatgcagata
ctgaaaaatgtccgagctacagccggaaggtcaaagaaacttgttggggaactgaaaaatctcaaagctaaaatgtatgg
tatagaaaatgacctgaagcatttatag

Protein
Protein IDpfu_aug2.0_348.1_27262.t1
Definition-
>pfu_aug2.0_348.1_27262.t1
MGTRNDDGSNKGKNVSMDKGPEKVAPPKSISTTANKLMTSLMDTSGEVDDSFKDFRSRKDDKLPNVNERLGHLRPSRELL
EYYRKKIAEYDEEHDHMVSKLEDYRCTYEEQHKLQWELRQREEEIVELQKALSDMQVYLFQEREHVLRLYSENDRLKIRE
LEDKKKIQQLLSLSGTAESEITYFMKEPPAKAVVEQKTKNKRPASASDVKHHKGVKKKQVPVAERRGSIEAIPEEKYKHD
NEVLALQVEALQAQLQEQTKLAKEQNFSTLINLYLSLNMKLRYVTYMENNIFPIRLHKTQDLLYESTKDFLELRYQGRST
ERVFMAEKDKLLRDLDQMKVKLHPERDSVLDMSDGTGPAHQKEEMKSLEYQLQQSQKLAEMYREQVIQLEDELSRIREEG
DVTREIFKDRSDKMTKRLQLMNQRYQDLERRRNLEVEGFKNDIKNLRSRLKDVERQLYKVTMGFAEEIDVKRPEDLDMQI
LKNVRATAGRSKKLVGELKNLKAKMYGIENDLKHL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495