Gene
| Gene Model ID | pfu_aug2.0_348.1_27271 |
|---|---|
| Locus | scaffold348.1 : 215823 ... 248363 : - |
| To GenomeBrowser | scaffold348.1:215823..248363 |
| Genes list of scaffold | scaffold348.1 |
| Synonym | pfu_aug1.0_87.1_21983 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_348.1_27271.t1 | 2 | 1 | Neur_chan_LBD | 29 | 208 | 3.0e-37 | 127.8 | 6.09999e-41 | 3.0e-37 | 127.8 |
| pfu_aug2.0_348.1_27271.t1 | 2 | 2 | Neur_chan_LBD | 521 | 545 | 3.0e-37 | 127.8 | 0.3 | 1500.0 | -1.9 |
| pfu_aug2.0_348.1_27271.t1 | 1 | 1 | Exo_endo_phos | 529 | 787 | 1.3e-22 | 80.9 | 5.1e-26 | 2.5e-22 | 80.0 |
Transcript
| Transcript ID | pfu_aug2.0_348.1_27271.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_348.1_27271.t1 atggagaataggaggaccatgacaacaagtctttggttaatgtttctatggattcctgtaatatattcgcatacattcga tgacgaaaaacgtttgcgaaataaactgtttgattcatacaacagtgatattcggcctccctttgatcatacgacgacat taaacgtttcagttctatatttcattagaagtgtacatgatttggacgatgtctcgagaatttttacagtatctggtgct ttccagtcacagtggacagacaaaaggttggtatggaatacaagtgaattttcaaatatacaaactattgtcgtctcata caaagatatttgggtaccagagctgagagtatataatgcggcagatgaaatgcatctcgattccgcccattcctctgtcc atatcaacagtaacggttcattattctggcttcaagggacgaccattaaggctacttacgaaccggatatgacgtatttt ccttatgacactcaaacatgtaaacttcaagtctatagtacaaggctgacgggggactatataaaggtacagggacaaca agacacaacgcccacaccgagcggtccagcaaacaacaatggacaacaaaacacagcaacaccctcatcaatcggtcaaa ccaacaacaagaaacaacaagacacaacaacacgcacaccgagcggtccaacaaataacatgggacaacaagacactaca acacccacaccgagcggtccaagaaacaacaagggacaacaagacactacagcacccacaccgagcggtcaaacaaacaa caagggacaacaagacacaacaacactcgcaccaagcggtccagcttgggacaacaacacccgcaccgagcggtcttaca aacaacaagggacaacaacacacatcaacacccgcaccgagcggtccattctaggacaacaacacccgcatcgagcggtc tatcaaacaacaagggacaacaagacaacaacacccgaatcgagcggtccaacaagggacaacaacaccaacaccgagcg gtcttacaaacaacaagggacaacaacacccgcaccgagcggcctaacaaacagccatagcagaccaaggaaaacattaa gtacgaatggcttattacataaaatctatcgttcaattttcataaaccaaatcatcttctcgagacaagtgttcgtaata ccttactcccccttgtcggatgtcatgaatacacaaaactgcgtctgcgactatgacaaacttgagtatggtaatattct gagagaagaagtggaagatgtcaagtacactgatgatgatgtcaaaaaggcagtggagaatttgctatatacagaaaatg aatctgagccctatcaaccacaagacactgcagtcacaaaccttgactctatagacggtaaacctttatcatttggaaag ctgtttttcttgacactgatctgggagtcagatgatgatgaacattctcacagatttgtgatctctcagtataaggaaga ttattacgtttatacacatacattttccaggttttcaaaatattgctcaaccgattttacagtcatgacatataacatat ggaacactaatgcaaaaccaaaatactcccatgaaagatataaagagagaatcaaccacttagtgaaggtggtgagggag agcaatccagacattgtatgtttccaggaagtaagatttcaggccaaaagaggaggggatcttggaccaagtcagatgga acacttatatacaatgcttccagaatatgaacagttcatcttcattccggcacaacttcaaggaaacagcctcaagaatg gtaggactgaggaaggtgtagccattttctccaaatttccaatcttatcatttcatcataaatttctctttagaaacaga agcaatgatgcagatcgtcatcagagggttttacttcatgctgagattcaacatacctcaggtactaagataaatgtgat gaatacacacttttcattaagtcatgaggctcgagccaagaaagtagtggaaatctggcactatataaaggatataaaag gacctgtggttttagtgggagattttaacgaatttccagagaaacctcctatgagatttttacgtggagaggagactttg gaaggatacagggcatcagggattacagacagctggcagctattaaggaaagatgaagcaggatttacatttagttgttt acgtcctgagcctacagaaaggattgattacatttacttccgggatggtgaaggattattgttgaaaaaaataacattgg aagatgatggcttgaaaggtgagaaagcagcatcagaccattcaccattacaggccttattttcacttcaagatcttaca atataa |
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Protein
| Protein ID | pfu_aug2.0_348.1_27271.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_348.1_27271.t1 MENRRTMTTSLWLMFLWIPVIYSHTFDDEKRLRNKLFDSYNSDIRPPFDHTTTLNVSVLYFIRSVHDLDDVSRIFTVSGA FQSQWTDKRLVWNTSEFSNIQTIVVSYKDIWVPELRVYNAADEMHLDSAHSSVHINSNGSLFWLQGTTIKATYEPDMTYF PYDTQTCKLQVYSTRLTGDYIKVQGQQDTTPTPSGPANNNGQQNTATPSSIGQTNNKKQQDTTTRTPSGPTNNMGQQDTT TPTPSGPRNNKGQQDTTAPTPSGQTNNKGQQDTTTLAPSGPAWDNNTRTERSYKQQGTTTHINTRTERSILGQQHPHRAV YQTTRDNKTTTPESSGPTRDNNTNTERSYKQQGTTTPAPSGLTNSHSRPRKTLSTNGLLHKIYRSIFINQIIFSRQVFVI PYSPLSDVMNTQNCVCDYDKLEYGNILREEVEDVKYTDDDVKKAVENLLYTENESEPYQPQDTAVTNLDSIDGKPLSFGK LFFLTLIWESDDDEHSHRFVISQYKEDYYVYTHTFSRFSKYCSTDFTVMTYNIWNTNAKPKYSHERYKERINHLVKVVRE SNPDIVCFQEVRFQAKRGGDLGPSQMEHLYTMLPEYEQFIFIPAQLQGNSLKNGRTEEGVAIFSKFPILSFHHKFLFRNR SNDADRHQRVLLHAEIQHTSGTKINVMNTHFSLSHEARAKKVVEIWHYIKDIKGPVVLVGDFNEFPEKPPMRFLRGEETL EGYRASGITDSWQLLRKDEAGFTFSCLRPEPTERIDYIYFRDGEGLLLKKITLEDDGLKGEKAASDHSPLQALFSLQDLT I |
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