Gene
| Gene Model ID | pfu_aug2.0_348.1_27272 |
|---|---|
| Locus | scaffold348.1 : 251824 ... 253108 : + |
| To GenomeBrowser | scaffold348.1:251824..253108 |
| Genes list of scaffold | scaffold348.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_348.1_27272.t1 | 1 | 1 | Neur_chan_LBD | 2 | 168 | 1.9e-25 | 89.2 | 7.7e-29 | 2.8e-25 | 88.7 |
| pfu_aug2.0_348.1_27272.t1 | 1 | 1 | Neur_chan_memb | 179 | 309 | 2.0e-11 | 44.2 | 7.1e-15 | 2.6e-11 | 43.8 |
Transcript
| Transcript ID | pfu_aug2.0_348.1_27272.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_348.1_27272.t1 atgagtgcaattaaagatattaacgatgcaaaggggacaatatcaacattagggggatttaccttctcttggattgacga caggctcatgtggaacgtcagtgaatatggtggaataagagaaatagttctacagcacgggcaaacatggctcccgagtg taatagcaatgaatgccgcttcacttgcgtttttcgaatatcaagacacctttttgagattgcaaagcaatggatcaatc ggatggcgctttttcactcacgtggaaacgagtttcaaaccggatatgacgtatttcccacatgacactcagatttgttc tatagaactttcattaatcggttactatccatcggaagtagctctgtataatgaaacccaagacattattcttgacggct accaaacaaacaaaaaatgggaagtggttgataccgaagcgaaaccactatatatcggtcccttctctggaatggttcag ttcaagatggagcttagaagaagacatttttattttgacgtcatgattatgatgcctctctcagttttctgtgttgttta cgttgttgtatttcttgtacctatagaaagtggagagaaagtttcttttgcgataacacttctacccacatttggtgttt atctgtctgaagtaagcgacaacatgcccaaagtctccactcagatggcttatctatcgttttatttagtcgctatacta tttggcactgcgttctcttgtgttttctccattgcgatatcaagtctgtacttcaaaaggcagcaaccagctccgaagcc gttgaccatcatagcccatataatttctttccaatggcttatgcgcattctagaaaggtgccagatctcccaaaagaaat ccgacgagaaacagaagcaaactgcttggacggaaacagaaagttacgcagtgatgtcatcacagcatgcttcgaaaaaa cttaataacattttctttatatatgcttgcttgggagttattgtattacatcttttcgctatacatgcatactttctaag gtag |
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Protein
| Protein ID | pfu_aug2.0_348.1_27272.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_348.1_27272.t1 MSAIKDINDAKGTISTLGGFTFSWIDDRLMWNVSEYGGIREIVLQHGQTWLPSVIAMNAASLAFFEYQDTFLRLQSNGSI GWRFFTHVETSFKPDMTYFPHDTQICSIELSLIGYYPSEVALYNETQDIILDGYQTNKKWEVVDTEAKPLYIGPFSGMVQ FKMELRRRHFYFDVMIMMPLSVFCVVYVVVFLVPIESGEKVSFAITLLPTFGVYLSEVSDNMPKVSTQMAYLSFYLVAIL FGTAFSCVFSIAISSLYFKRQQPAPKPLTIIAHIISFQWLMRILERCQISQKKSDEKQKQTAWTETESYAVMSSQHASKK LNNIFFIYACLGVIVLHLFAIHAYFLR |
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