Gene
| Gene Model ID | pfu_aug2.0_35.1_16746 |
|---|---|
| Locus | scaffold35.1 : 66776 ... 76625 : - |
| To GenomeBrowser | scaffold35.1:66776..76625 |
| Genes list of scaffold | scaffold35.1 |
| Synonym | pfu_aug1.0_1784.1_08117 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_35.1_16746.t1 | 2 | 1 | EF-hand_7 | 44 | 103 | 1.2e-20 | 73.4 | 1.1e-15 | 1.5e-12 | 47.4 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 1 | EF-hand_1 | 47 | 70 | 2.6e-22 | 76.3 | 6.7e-06 | 0.009 | 15.2 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 1 | EF-hand_5 | 47 | 66 | 4.7e-16 | 57.2 | 0.0074 | 9.9 | 5.7 |
| pfu_aug2.0_35.1_16746.t1 | 6 | 1 | EF-hand_6 | 48 | 70 | 1.4e-19 | 68.0 | 1.2e-05 | 0.016 | 15.0 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 1 | EF-hand_8 | 48 | 70 | 4.3e-12 | 45.4 | 0.014 | 19.0 | 4.9 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 2 | EF-hand_8 | 62 | 103 | 4.3e-12 | 45.4 | 2.8e-12 | 3.8e-09 | 36.0 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 2 | EF-hand_1 | 80 | 105 | 2.6e-22 | 76.3 | 6.5e-11 | 8.7e-08 | 30.9 |
| pfu_aug2.0_35.1_16746.t1 | 6 | 2 | EF-hand_6 | 80 | 105 | 1.4e-19 | 68.0 | 1.1e-08 | 1.5e-05 | 24.5 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 2 | EF-hand_5 | 81 | 100 | 4.7e-16 | 57.2 | 1.9e-08 | 2.6e-05 | 23.3 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 3 | EF-hand_1 | 116 | 139 | 2.6e-22 | 76.3 | 1.5e-06 | 0.002 | 17.2 |
| pfu_aug2.0_35.1_16746.t1 | 2 | 2 | EF-hand_7 | 117 | 185 | 1.2e-20 | 73.4 | 1.2e-08 | 1.6e-05 | 24.9 |
| pfu_aug2.0_35.1_16746.t1 | 6 | 3 | EF-hand_6 | 117 | 140 | 1.4e-19 | 68.0 | 8.6e-07 | 0.0012 | 18.5 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 3 | EF-hand_5 | 117 | 139 | 4.7e-16 | 57.2 | 1.1e-06 | 0.0015 | 17.8 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 3 | EF-hand_8 | 120 | 136 | 4.3e-12 | 45.4 | 0.073 | 99.0 | 2.6 |
| pfu_aug2.0_35.1_16746.t1 | 6 | 4 | EF-hand_6 | 150 | 164 | 1.4e-19 | 68.0 | 1.6 | 2200.0 | -1.0 |
| pfu_aug2.0_35.1_16746.t1 | 6 | 5 | EF-hand_6 | 160 | 186 | 1.4e-19 | 68.0 | 0.00046 | 0.62 | 10.1 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 4 | EF-hand_1 | 171 | 185 | 2.6e-22 | 76.3 | 0.00015 | 0.2 | 11.0 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 4 | EF-hand_5 | 171 | 182 | 4.7e-16 | 57.2 | 0.0012 | 1.6 | 8.2 |
| pfu_aug2.0_35.1_16746.t1 | 4 | 4 | EF-hand_8 | 171 | 185 | 4.3e-12 | 45.4 | 0.0023 | 3.0 | 7.5 |
| pfu_aug2.0_35.1_16746.t1 | 6 | 6 | EF-hand_6 | 250 | 260 | 1.4e-19 | 68.0 | 4.6 | 6300.0 | -2.4 |
Transcript
| Transcript ID | pfu_aug2.0_35.1_16746.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16746.t1 atggcgttctttggagacgatgatgagcagaacagacaggcttttcaccagagaatggaatcaacatccaatcctataga gaaactgagatatgcatgtctggaaaggggagctagcggcatcaaagggctgggcaggagtttccgtataatggacgatg acggaagtaagaatttaagttacgaggaactcaggaacggactccgagattacggactacgtttggatgataatacagtc caggaactgttccgggaactggataaggacggaagcggaaaacttagctacgatgaatttctagtcgccatcaggggacc aataaacgatcgtaggagggcggtagttgagaaagcttttgccaagatggacgccacaggtgacggtgtgataaccatag aggacatacgtcagctatatgacgtcagccagcatccaaaatatcagagtggagagtggtcagctgaccagtgcttcaga aaattcttagacagctttgattctccaaatgacaaggacggaaaggtgacaacagaggaatttataaactactacaccgg tgttagtgcttctgttgactcagatgattactttgagaaaatgatgatcagagcttggaggctcttcagacaagaccata aggaagaaaatatcaaaactgaatgcaaggatgaagataaactatgcatcaaaccccatgtaggaatgtcaaaggaatcg tcatcgaaaatcaattggagatacctcatggcgttttacggatatgacgatgagcggaacagacaggcctttcaccagag aatggaatccacatcaaatcctatagagaaactgagatacgcctgtctagagaggggagctagcggcatcaaaggactgg gcagtttgagccccagatcccgagggtcttggaatatggatgcgtcactcacttag |
|
Protein
| Protein ID | pfu_aug2.0_35.1_16746.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16746.t1 MAFFGDDDEQNRQAFHQRMESTSNPIEKLRYACLERGASGIKGLGRSFRIMDDDGSKNLSYEELRNGLRDYGLRLDDNTV QELFRELDKDGSGKLSYDEFLVAIRGPINDRRRAVVEKAFAKMDATGDGVITIEDIRQLYDVSQHPKYQSGEWSADQCFR KFLDSFDSPNDKDGKVTTEEFINYYTGVSASVDSDDYFEKMMIRAWRLFRQDHKEENIKTECKDEDKLCIKPHVGMSKES SSKINWRYLMAFYGYDDERNRQAFHQRMESTSNPIEKLRYACLERGASGIKGLGSLSPRSRGSWNMDASLT |
|