Gene
| Gene Model ID | pfu_aug2.0_35.1_16758 |
|---|---|
| Locus | scaffold35.1 : 327991 ... 335543 : - |
| To GenomeBrowser | scaffold35.1:327991..335543 |
| Genes list of scaffold | scaffold35.1 |
| Synonym | pfu_aug1.0_3120.1_51892 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cytoplasmic 2 | GO:0005524 GO:0005737 GO:0005856 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_35.1_16758.t1 | 1 | 1 | Actin | 7 | 332 | 0.0 | 476.9 | 0.0 | 0.0 | 476.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_35.1_16758.t1 | gi|676421273|ref|XP_009043798.1| | hypothetical protein LOTGIDRAFT_227913 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_35.1_16758.t1 | gi|676492678|ref|XP_009065998.1| | hypothetical protein LOTGIDRAFT_205506 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_35.1_16758.t1 | gi|241157545|ref|XP_002408110.1| | actin, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_35.1_16758.t1 | gi|156395354|ref|XP_001637076.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_35.1_16758.t1 | gi|700396038|ref|XP_009938638.1| | PREDICTED: actin, cytoplasmic 2-like [Opisthocomus hoazin] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_35.1_16758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16758.t1 atggttggtatgggacagaaggacagctatgtaggagacgaggcccaaagtaagagaggtatcctcaccctcaaataccc cattgagcacggaattgtcacaaactgggacgatatggagaagatctggcatcataccttctacaatgaactccgtgtgg cccccgaagaacaccctgttctcctgactgaagctcctctcaacccaaaggccaacagagaaaagatgacacagatcatg tttgaaaccttcaactctcctgccatgtacgtagctatccaggccgtattgtcactgtacgcttccggtcgtactacagg tatcgtactggactctggggatggggtatcacatacagtacctatctacgagggatacgcccttccccacgccatcatga ggttagatcttgccggacgtgacctcacagattaccttatgaagatcctcacagagcgtgggtactcgttcaccaccaca gctgagagagaaatcgtcagagacattaaagaaaaactatgttatgttgcattggactttgatcaagaaatgcaaacagc ttcatcgtcatcatctctagagaagagctatgaacttcctgacggtcaggtcatcaccattggtaacgaaaggttcagat gtcccgaggccatgttccagccatctttcctcggtatggaatcaacaggaattcacgagaccacgtacaacagtatcatg aaatgtgacgtagacattcgtaaagacttgtacgcaaataccgttttatctggtggttctaccatgtacccaggtatcgc tgaccgtatgcagaaagaaatatccgctcttgctccatcaacgatgaaaattaagatcatagctccaccagagaggaaat actccgtgtggataggtggatctatccttgcttctctctccaccttccagcagatgtggatcagcaaacaggaatacgac gagtctggtccatcaatcgtccacaggaagtgcttctaa |
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Protein
| Protein ID | pfu_aug2.0_35.1_16758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16758.t1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTT AEREIVRDIKEKLCYVALDFDQEMQTASSSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESTGIHETTYNSIM KCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD ESGPSIVHRKCF |
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