Gene
| Gene Model ID | pfu_aug2.0_35.1_16759 |
|---|---|
| Locus | scaffold35.1 : 335592 ... 341113 : - |
| To GenomeBrowser | scaffold35.1:335592..341113 |
| Genes list of scaffold | scaffold35.1 |
| Synonym | pfu_aug1.0_3120.1_51891 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| actin-5c | GO:0000281 GO:0002121 GO:0005200 GO:0005524 GO:0005737 GO:0005811 GO:0005875 GO:0005884 GO:0006909 GO:0007010 GO:0007291 GO:0016319 GO:0031011 GO:0032507 GO:0035148 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_35.1_16759.t1 | 1 | 1 | Actin | 4 | 376 | 0.0 | 535.6 | 0.0 | 0.0 | 535.4 |
Transcript
| Transcript ID | pfu_aug2.0_35.1_16759.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16759.t1 atggcagacgaagacgttgcagctttagttattgacaatggatcgggtatgtgcaaggctgggttcgcaggagacgatgc ccctcgcgccgtcttcccctccatcgtcggcagacccaggcatcagggtgtgatggttggtatgggacagaaggacagct atgtaggagacgaggcccagagtaagagaggtatcctcaccctcaaataccccattgaacacggcattgtcacaaactgg gacgatatggagaagatttggcatcataccttctacaatgaactccgtgtggcccccgaggaacaccctgttctcctgac tgaggcgccactcaacccaaaggcaaacagagaaaagatgacacagatcatgtttgaaaccttcaactctcctgccatgt acgtagctatccaggccgtattgtcactgtacgcttccggtcgtactacaggtatcgtactggactctggggatggggta tcacacacagtacctatctacgagggatacgccctcccccacgccatcatgaggttagatcttgctggacgtgacctcac agattaccttatgaagatcctaacagagcgtggctactcattcaccaccacagctgagagagaaatcgtcagagacatta aagaaaaattgaattatgttgccttagactttgaacaagaaatgcaaacggctgcatcatcatcatctctagagaagagt tacgaacttcccgacggtcaggtcatcactattggtaacgaaaggttcagggcccccgaggccatgttccagccatcttt cctcggtatggaatcttcgggtatacatgaaacaacatacaacagtataatgaaatgtgacgtagacattcgtaaagact tgtacgcaaataccgttttatctggtggttctaccatgtacccaggtattgctgaccgtatgcagaaagaaatcacagct cttgctccatcaacaatgaaaatcaagatcatagctccaccagagaggaaatactcggtgtggattggtggatctatcct cgcttctctctccaccttccagcagatgtggatcagcaaacaggagtacgacgagtccggcccatcaatcgtccacagga agtgcttctag |
|
Protein
| Protein ID | pfu_aug2.0_35.1_16759.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16759.t1 MADEDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV SHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLNYVALDFEQEMQTAASSSSLEKS YELPDGQVITIGNERFRAPEAMFQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITA LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF |
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