Gene
| Gene Model ID | pfu_aug2.0_35.1_16761 |
|---|---|
| Locus | scaffold35.1 : 361046 ... 366746 : - |
| To GenomeBrowser | scaffold35.1:361046..366746 |
| Genes list of scaffold | scaffold35.1 |
| Synonym | pfu_aug1.0_3120.1_51890 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| growth arrest and dna damage-inducible protein gadd45 alpha isoform x1 | GO:0006950 GO:0031323 GO:0044763 GO:0048522 GO:0051716 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_35.1_16761.t1 | 1 | 1 | Ribosomal_L7Ae | 23 | 103 | 2.1e-07 | 30.3 | 2.5e-11 | 3.7e-07 | 29.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_35.1_16761.t1 | gi|676477139|ref|XP_009061017.1| | hypothetical protein LOTGIDRAFT_234627 [Lottia gigantea] | 5.0e-30 |
| pfu_aug2.0_35.1_16761.t1 | gi|676477136|ref|XP_009061016.1| | hypothetical protein LOTGIDRAFT_165742 [Lottia gigantea] | 2.0e-27 |
| pfu_aug2.0_35.1_16761.t1 | gi|676421053|ref|XP_009043769.1| | hypothetical protein LOTGIDRAFT_227883 [Lottia gigantea] | 8.0e-25 |
| pfu_aug2.0_35.1_16761.t1 | gi|524901261|ref|XP_005107041.1| | PREDICTED: growth arrest and DNA damage-inducible protein GADD45 alpha-like [Aplysia californica] | 1.0e-22 |
| pfu_aug2.0_35.1_16761.t1 | gi|657739678|ref|XP_008335309.1| | PREDICTED: growth arrest and DNA damage-inducible protein GADD45 beta [Cynoglossus semilaevis] | 7.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_35.1_16761.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16761.t1 atgactttacccgaagcttgcaaaatggaaaaaccagttctcaagaagtcgatgaatattggagaagccgtgaaggaagt tctgctacaggcgctgggcgaaaaccgcatcacttacggagtgtatgcttgcgctaaagaattagaaataagtccagaga ctgtgatgttatgtgttctgccacacgctgaccaggtgcatgatgttgcaattcacatacaacacaccctgatggaggcg tactgcctggagcatgacatacaaatccttaaggttgacgaatctagaaagttggcagcgatactggcataccaacagga ctcggccaacaacaacgagcagacgacagacgagcgcctcctgacggacttcagtagtgtgataattcagaatccgaaac agaagagcaatgcagagcagtttgtgatcgacttttgtcacatggtgtccgaaaacgaggtctttcctaaacctaaaata gaactaccagtttga |
|
Protein
| Protein ID | pfu_aug2.0_35.1_16761.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16761.t1 MTLPEACKMEKPVLKKSMNIGEAVKEVLLQALGENRITYGVYACAKELEISPETVMLCVLPHADQVHDVAIHIQHTLMEA YCLEHDIQILKVDESRKLAAILAYQQDSANNNEQTTDERLLTDFSSVIIQNPKQKSNAEQFVIDFCHMVSENEVFPKPKI ELPV |
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