Gene
| Gene Model ID | pfu_aug2.0_35.1_16767 |
|---|---|
| Locus | scaffold35.1 : 475478 ... 501456 : - |
| To GenomeBrowser | scaffold35.1:475478..501456 |
| Genes list of scaffold | scaffold35.1 |
| Synonym | pfu_aug1.0_290583.1_14384 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_35.1_16767.t1 | 10 | 1 | LRR_6 | 84 | 99 | 2.6e-17 | 60.8 | 8.5 | 13000.0 | -3.1 |
| pfu_aug2.0_35.1_16767.t1 | 10 | 2 | LRR_6 | 105 | 127 | 2.6e-17 | 60.8 | 0.00025 | 0.37 | 10.9 |
| pfu_aug2.0_35.1_16767.t1 | 4 | 1 | LRR_4 | 107 | 148 | 3.5e-09 | 36.0 | 0.0041 | 6.2 | 6.5 |
| pfu_aug2.0_35.1_16767.t1 | 9 | 1 | LRR_1 | 107 | 119 | 9.8e-08 | 31.0 | 0.14 | 200.0 | 2.6 |
| pfu_aug2.0_35.1_16767.t1 | 4 | 1 | LRR_8 | 109 | 149 | 3.3e-06 | 26.7 | 0.015 | 22.0 | 4.9 |
| pfu_aug2.0_35.1_16767.t1 | 10 | 3 | LRR_6 | 135 | 153 | 2.6e-17 | 60.8 | 0.00013 | 0.19 | 11.8 |
| pfu_aug2.0_35.1_16767.t1 | 9 | 2 | LRR_1 | 136 | 147 | 9.8e-08 | 31.0 | 0.055 | 81.0 | 3.8 |
| pfu_aug2.0_35.1_16767.t1 | 10 | 4 | LRR_6 | 163 | 180 | 2.6e-17 | 60.8 | 0.37 | 550.0 | 1.2 |
| pfu_aug2.0_35.1_16767.t1 | 4 | 2 | LRR_4 | 164 | 207 | 3.5e-09 | 36.0 | 7.5e-06 | 0.011 | 15.3 |
| pfu_aug2.0_35.1_16767.t1 | 9 | 3 | LRR_1 | 164 | 180 | 9.8e-08 | 31.0 | 0.19 | 280.0 | 2.2 |
| pfu_aug2.0_35.1_16767.t1 | 4 | 2 | LRR_8 | 164 | 213 | 3.3e-06 | 26.7 | 0.00043 | 0.64 | 9.8 |
| pfu_aug2.0_35.1_16767.t1 | 10 | 5 | LRR_6 | 190 | 207 | 2.6e-17 | 60.8 | 0.0016 | 2.4 | 8.5 |
| pfu_aug2.0_35.1_16767.t1 | 4 | 3 | LRR_8 | 190 | 226 | 3.3e-06 | 26.7 | 0.0047 | 7.0 | 6.4 |
| pfu_aug2.0_35.1_16767.t1 | 9 | 4 | LRR_1 | 192 | 206 | 9.8e-08 | 31.0 | 0.006 | 8.9 | 6.7 |
| pfu_aug2.0_35.1_16767.t1 | 10 | 6 | LRR_6 | 218 | 239 | 2.6e-17 | 60.8 | 0.013 | 19.0 | 5.6 |
| pfu_aug2.0_35.1_16767.t1 | 4 | 3 | LRR_4 | 223 | 260 | 3.5e-09 | 36.0 | 0.039 | 58.0 | 3.4 |
| pfu_aug2.0_35.1_16767.t1 | 9 | 5 | LRR_1 | 223 | 231 | 9.8e-08 | 31.0 | 0.71 | 1100.0 | 0.4 |
| pfu_aug2.0_35.1_16767.t1 | 3 | 1 | EF-hand_8 | 225 | 233 | 2.5e-08 | 33.4 | 1.3 | 2000.0 | -1.5 |
| pfu_aug2.0_35.1_16767.t1 | 10 | 7 | LRR_6 | 247 | 267 | 2.6e-17 | 60.8 | 0.00059 | 0.87 | 9.8 |
| pfu_aug2.0_35.1_16767.t1 | 9 | 6 | LRR_1 | 247 | 259 | 9.8e-08 | 31.0 | 0.54 | 800.0 | 0.8 |
| pfu_aug2.0_35.1_16767.t1 | 10 | 8 | LRR_6 | 276 | 294 | 2.6e-17 | 60.8 | 0.25 | 370.0 | 1.7 |
| pfu_aug2.0_35.1_16767.t1 | 9 | 7 | LRR_1 | 276 | 287 | 9.8e-08 | 31.0 | 1.1 | 1600.0 | -0.2 |
| pfu_aug2.0_35.1_16767.t1 | 4 | 4 | LRR_8 | 276 | 334 | 3.3e-06 | 26.7 | 0.00095 | 1.4 | 8.7 |
| pfu_aug2.0_35.1_16767.t1 | 10 | 9 | LRR_6 | 307 | 317 | 2.6e-17 | 60.8 | 6.9 | 10000.0 | -2.8 |
| pfu_aug2.0_35.1_16767.t1 | 9 | 8 | LRR_1 | 307 | 324 | 9.8e-08 | 31.0 | 8.3 | 12000.0 | -2.8 |
| pfu_aug2.0_35.1_16767.t1 | 4 | 4 | LRR_4 | 326 | 357 | 3.5e-09 | 36.0 | 0.021 | 31.0 | 4.3 |
| pfu_aug2.0_35.1_16767.t1 | 10 | 10 | LRR_6 | 333 | 351 | 2.6e-17 | 60.8 | 0.35 | 520.0 | 1.2 |
| pfu_aug2.0_35.1_16767.t1 | 9 | 9 | LRR_1 | 333 | 345 | 9.8e-08 | 31.0 | 1.2 | 1700.0 | -0.2 |
| pfu_aug2.0_35.1_16767.t1 | 3 | 2 | EF-hand_8 | 403 | 424 | 2.5e-08 | 33.4 | 5.1e-06 | 0.0076 | 15.8 |
| pfu_aug2.0_35.1_16767.t1 | 2 | 1 | EF-hand_1 | 404 | 428 | 1.1e-07 | 30.5 | 3.5e-08 | 5.1e-05 | 22.2 |
| pfu_aug2.0_35.1_16767.t1 | 1 | 1 | EF-hand_7 | 405 | 456 | 2.6e-08 | 33.8 | 5.6e-11 | 8.4e-08 | 32.2 |
| pfu_aug2.0_35.1_16767.t1 | 3 | 3 | EF-hand_8 | 432 | 456 | 2.5e-08 | 33.4 | 5.2e-06 | 0.0078 | 15.8 |
| pfu_aug2.0_35.1_16767.t1 | 2 | 2 | EF-hand_1 | 439 | 456 | 1.1e-07 | 30.5 | 0.00053 | 0.79 | 9.1 |
Transcript
| Transcript ID | pfu_aug2.0_35.1_16767.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16767.t1 atgggaagaatacgtgaatcactttcattggatggtacgtcaacggcgaccttgacctcatctcctataccctctatatc tatccaaaaggcacctgtagaggacgaccaggaaactgtcctggatatatcagtcccaattataaattatgacgacactg gacagaagacgtacgaacgggcgtgtaagaagtatggtactgtaccttcctccaaactcctgaccaagctgggagaggag aaggaaatcgatatcaagtattacggactggggcctataggaaccagggccatatgtgtggcgttagtcataaataacaa cataacgaaagtgaatatacgaggaaataacatagataaacaagggatcctctatatacagaaaatgatgtcagaaaata tgtccataacagaactagatatatcagaaaataagcttggcagctatggtgctaaatgtgtaggatggatgctccaagat aataaatatatcaaaaggatatcactctcagcaaatgaatttacagatctggacgctcacttcttcctgaaacaaataga ggagcatccgactttagagtatgtggatctgagcagaaacttctttggggacattgcagcgcctcagtttgaatccatga tatctgaaaaccaacaaattttagacttagatttgagctggaacgagttccgtgtacctggtgctaaacatcttgccgac ggtctgaaagaaaatatgaaattaaaacgattcaatgtatcatggaacggtttggatgatggaggagccaaggcgtttgg ggactgtatagcccataatgcagtactgaaggaacttgacgtgacgtgtaccaggattggagcggtgggctttgtttcta tcataaatgggttgtgcaaaaacgaagatcttgatgttattagaattggcaagaacaacttacttgaggagtacgtgaag gcagctttcttaccacttatggaactacagtcactcaagcttactctcctagatctatcggaggtgatgcttagtgagga atttgtcaaagcggatatagaaccgctgaaggagaagtttccggaacttgagataatccacggctacactgattcctacg gcaagaggaagatggccggtttcgccgaccagggagaggatgctctgtggaccataaaggagtatatagagagacagaac cttactgtagctcagctgtttgccaagtttgacgaggatggcagtaacagtgtggactatgatgaatttagacaaggaat taaggaggccaaaatccccttgacctcaaaccaagtggacagtctaatcaaatatatagacattgatggtgatggtgaca tagacttcaggctatgtggtgctaatgacttctga |
|
Protein
| Protein ID | pfu_aug2.0_35.1_16767.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16767.t1 MGRIRESLSLDGTSTATLTSSPIPSISIQKAPVEDDQETVLDISVPIINYDDTGQKTYERACKKYGTVPSSKLLTKLGEE KEIDIKYYGLGPIGTRAICVALVINNNITKVNIRGNNIDKQGILYIQKMMSENMSITELDISENKLGSYGAKCVGWMLQD NKYIKRISLSANEFTDLDAHFFLKQIEEHPTLEYVDLSRNFFGDIAAPQFESMISENQQILDLDLSWNEFRVPGAKHLAD GLKENMKLKRFNVSWNGLDDGGAKAFGDCIAHNAVLKELDVTCTRIGAVGFVSIINGLCKNEDLDVIRIGKNNLLEEYVK AAFLPLMELQSLKLTLLDLSEVMLSEEFVKADIEPLKEKFPELEIIHGYTDSYGKRKMAGFADQGEDALWTIKEYIERQN LTVAQLFAKFDEDGSNSVDYDEFRQGIKEAKIPLTSNQVDSLIKYIDIDGDGDIDFRLCGANDF |
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