Gene
| Gene Model ID | pfu_aug2.0_35.1_16768 |
|---|---|
| Locus | scaffold35.1 : 504060 ... 528196 : - |
| To GenomeBrowser | scaffold35.1:504060..528196 |
| Genes list of scaffold | scaffold35.1 |
| Synonym | pfu_aug1.0_6901.1_09453 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_35.1_16768.t1 | 1 | 1 | CP2 | 607 | 788 | 0.0 | 198.0 | 0.0 | 0.0 | 196.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_35.1_16768.t1 | gi|676436327|ref|XP_009047846.1| | hypothetical protein LOTGIDRAFT_157385 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_35.1_16768.t1 | gi|339248491|ref|XP_003373233.1| | protein grainyhead [Trichinella spiralis] | 0.0 |
| pfu_aug2.0_35.1_16768.t1 | gi|749749191|ref|XP_011136803.1| | PREDICTED: protein grainyhead isoform X2 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_35.1_16768.t1 | gi|571527381|ref|XP_006562178.1| | PREDICTED: protein grainyhead isoform X4 [Apis mellifera] | 0.0 |
| pfu_aug2.0_35.1_16768.t1 | gi|746872183|ref|XP_011067346.1| | PREDICTED: protein grainyhead isoform X2 [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_35.1_16768.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16768.t1 atgagtgtagatcaaagttcgtcgactaaagacggggttgacaacacacgggaagaaataaaaagcgaagaagatgcaga tgacgacgctaacagcggaagcccaaagtcacgtggtatcaacgacggacctccggatgacatccgagcatttttcggac atccgctcacggcggcggctacggcgattaacggcgaggatacgaacgcttcggcggcggcgctactccacgagtatatc aacctgccgtcactggataaaagtggcatgaaaataggcgacaccctctcctctatatatgacattctcaggaccgacga gaaaggggagaggacggagggatccccgactaaccttacccctgtcgctaatggtaacgaatacatgactctcctccaag cccatgtagacaaattcttccatcaaagctcacaagtcgctacgtcacaggaacaactacaggcgcatgcgcagttgcat gctcagcttcaaagtgttattgccgccaataatacagaagcaatggcggaagaaaagaaaacatcaccaaaggcaataaa gaaattaaaatccgttacgccgaaagaacgtgaaccaatcgttagcggcgtagagacacaggttatggtcacgtgttcag aattagcgggaagcgtaacggtacccgtcgctgtaattagtgataataatctatctggaacccaattagagaatgaccaa tatggttccaataaggcgccatcccctttaggcaatgaaaatgcattatttaaagaaactcaaacagcagtatcacacat tcctaattctgtggatacaagaaacactcctgtagttcagaatacagagtataacttgagagacgatattgacagcaaga ctgaagaacaaaaagaattaacaaagaaaatattcaaatctttagcggagaaaattctcagaaagaaagtgcaaaaactt caaacgactgccgatacagtgacaacaagtgctaattccgatgtaccagtgcagacaaacagcggaatgattcaaagttg gactgaactagacggaaagttgtcaatagacctgtcggcggtaacgtcgaccataccgagcgttgaccctcttcagacaa catccacaaccacaatgtctcagtgtttacaatctggcttgcctgtctcttccgtgccagtgattccagataatttgaac ttcaattccatgaatatgtccgtacagacttcgcaagaacagtgttttaccggttttccggacatccgtcctgtcgactt ccggcagacgattcccgccattaacctcaatcaaaacgctcaacagattccgaatactcagcagtcgatgcccgcggtac atcagcagcacacaccagcaagacagaactcactacccgtcacatcatgtaactactctactacaaacagttactggaat acctccgttacacctccccagaacggtcacatgactcctcagaacggtcacatgaccccagaggaaggctctgtgatgct ggagaggtacatacaacagcaacagttctaccaggaacaacaacagcagcagacgatgtacccgtatccgctttccatga aggaaaattatgccatgaagtcgccagacagtggtttccatgaaccttgtttatctcctcctgacgccaaccagatgggt tacaaggatgcccaggcaaacggcttccctgacggacagacaaacggctgccagaaagtcgctaaaaggaggaagtcggc tccggccatgtatgccaaaaactactggcaggcacacgagaaactcaacggatttagttccgtagtacccaaactggagg tgaatactacgggattcaactatttcttagaagcaccaatatctactgcctgtagaatagaggaagacaaagtcacatat cttaacaaaggtcagtattacggactgacattggaatacaaaggcaataaaatccctcatggacagatggtcaagagtgt gatcatggtggtgtttagagaagataaatcattggacgatgagaggaaagcgtgggaattctggcacagtaggcagcata gtcacaaacaaagggtcatagatatagacacaaaggacagccagggagtacagcccagtaatattacagaaatcgcctat aatgccgtctcagtacggtgggaccccagggaatcccccatcaaggtgaatttagctgtgcattgtttgagcactgactt cagtaaccaaaaaggcgtgaagggattaccactccatgttcagatagacacgtacgagaatgccagagactcccaccccg tacatcgtggatatagtcaaatcaaagtgttctgtgacaagtccagaataaaaactgagggtcaaactgataaacgtcgc catgacgaggagatttttcactcgccatgtgaacgtaccgagttctactccatggtggatattagaacactccctgtttt atactcacccaaccatgacgatgatattaatactaaagtaaatactagtcctgtccatttgggcatcaacggtgatgacg atggcaactcaagtctgaacagttcaggtgactgttttgacgatccttccatataccctcctgccaaacgtcagagaaca gactcattccataattatatggagtatcctaaggtgctattgtacgtccgagaacagcaggagacggtatttactgcact gatgatccggatacccacactgtacggtctcttacaagctattgaagagaagtatcagattccttcatccaaagtgaaga gtacttataaaagatcaaagaagggtattttagtgcggatggatgacaacattgtacgccattactcacacgagtcaacg tttatcatagagatgacccagctaggggaggagaaggactacgagatcattctcacagaaatcgacgtcaactag |
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Protein
| Protein ID | pfu_aug2.0_35.1_16768.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_35.1_16768.t1 MSVDQSSSTKDGVDNTREEIKSEEDADDDANSGSPKSRGINDGPPDDIRAFFGHPLTAAATAINGEDTNASAAALLHEYI NLPSLDKSGMKIGDTLSSIYDILRTDEKGERTEGSPTNLTPVANGNEYMTLLQAHVDKFFHQSSQVATSQEQLQAHAQLH AQLQSVIAANNTEAMAEEKKTSPKAIKKLKSVTPKEREPIVSGVETQVMVTCSELAGSVTVPVAVISDNNLSGTQLENDQ YGSNKAPSPLGNENALFKETQTAVSHIPNSVDTRNTPVVQNTEYNLRDDIDSKTEEQKELTKKIFKSLAEKILRKKVQKL QTTADTVTTSANSDVPVQTNSGMIQSWTELDGKLSIDLSAVTSTIPSVDPLQTTSTTTMSQCLQSGLPVSSVPVIPDNLN FNSMNMSVQTSQEQCFTGFPDIRPVDFRQTIPAINLNQNAQQIPNTQQSMPAVHQQHTPARQNSLPVTSCNYSTTNSYWN TSVTPPQNGHMTPQNGHMTPEEGSVMLERYIQQQQFYQEQQQQQTMYPYPLSMKENYAMKSPDSGFHEPCLSPPDANQMG YKDAQANGFPDGQTNGCQKVAKRRKSAPAMYAKNYWQAHEKLNGFSSVVPKLEVNTTGFNYFLEAPISTACRIEEDKVTY LNKGQYYGLTLEYKGNKIPHGQMVKSVIMVVFREDKSLDDERKAWEFWHSRQHSHKQRVIDIDTKDSQGVQPSNITEIAY NAVSVRWDPRESPIKVNLAVHCLSTDFSNQKGVKGLPLHVQIDTYENARDSHPVHRGYSQIKVFCDKSRIKTEGQTDKRR HDEEIFHSPCERTEFYSMVDIRTLPVLYSPNHDDDINTKVNTSPVHLGINGDDDGNSSLNSSGDCFDDPSIYPPAKRQRT DSFHNYMEYPKVLLYVREQQETVFTALMIRIPTLYGLLQAIEEKYQIPSSKVKSTYKRSKKGILVRMDDNIVRHYSHEST FIIEMTQLGEEKDYEIILTEIDVN |
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